Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

Click here to switch to the map view.

The map label for this gene is 117676310

Identifier: 117676310

GI number: 117676310

Start: 262445

End: 262816

Strand: Direct

Name: 117676310

Synonym: Shewana3_4373

Alternate gene names: NA

Gene position: 262445-262816 (Clockwise)

Preceding gene: 117676309

Following gene: 117676311

Centisome position: 94.09

GC content: 44.35

Gene sequence:

>372_bases
GTGACTATGTTTGCTGCATATTTGGTTATAGGTGTGTTTGGGTTCGTCGCTGGCCTAATTGTTTTGCTCAACAAAGGTAA
CCCATTACCAGCGGCAATTCCTCGTGCAGCATCGCTTAAGTTCATCCCAAGTAAGATCCCATGTGTTGCTAATCAATACC
CCGAAGTATGTGATGATGATACAGGTTTGAAACGTAGAACGGGCGCTTACCATGATTATCTTATCAATCCAGCTACAGGG
TTGCTTACGCTGAACGGCGCTTTGGATGTGGCAGGTAATCCTTTAGGAGCTGACTTGACTCATTCAGGCATCGATAGCGG
TCACGACTTTGACCATGACTTTGGTATGAATCGTTTTGGGAATGATTTTTAA

Upstream 100 bases:

>100_bases
GCGGCTTAATCCCTCCCATTCAGACGGCGCAAAGTTCAATTTTTGCGCCGTTTTGCATTTGTGAGATCCTTTAATCAGAT
AAGAAATTCAGTTATTAGAG

Downstream 100 bases:

>100_bases
TGGAATTATTGGAGACTACTCAAGCGGTTGCAGGCCAATTCTATGCGTTACAGCAAGAGCTGGTTTCGTTGAAGTCGACG
CTAATTTTGCCCTGTAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTMFAAYLVIGVFGFVAGLIVLLNKGNPLPAAIPRAASLKFIPSKIPCVANQYPEVCDDDTGLKRRTGAYHDYLINPATG
LLTLNGALDVAGNPLGADLTHSGIDSGHDFDHDFGMNRFGNDF

Sequences:

>Translated_123_residues
MTMFAAYLVIGVFGFVAGLIVLLNKGNPLPAAIPRAASLKFIPSKIPCVANQYPEVCDDDTGLKRRTGAYHDYLINPATG
LLTLNGALDVAGNPLGADLTHSGIDSGHDFDHDFGMNRFGNDF
>Mature_122_residues
TMFAAYLVIGVFGFVAGLIVLLNKGNPLPAAIPRAASLKFIPSKIPCVANQYPEVCDDDTGLKRRTGAYHDYLINPATGL
LTLNGALDVAGNPLGADLTHSGIDSGHDFDHDFGMNRFGNDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13095; Mature: 12964

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMFAAYLVIGVFGFVAGLIVLLNKGNPLPAAIPRAASLKFIPSKIPCVANQYPEVCDDD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
TGLKRRTGAYHDYLINPATGLLTLNGALDVAGNPLGADLTHSGIDSGHDFDHDFGMNRFG
CCCCCCCCCCCCEEECCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NDF
CCC
>Mature Secondary Structure 
TMFAAYLVIGVFGFVAGLIVLLNKGNPLPAAIPRAASLKFIPSKIPCVANQYPEVCDDD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
TGLKRRTGAYHDYLINPATGLLTLNGALDVAGNPLGADLTHSGIDSGHDFDHDFGMNRFG
CCCCCCCCCCCCEEECCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NDF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA