| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676306
Identifier: 117676306
GI number: 117676306
Start: 258087
End: 258452
Strand: Direct
Name: 117676306
Synonym: Shewana3_4369
Alternate gene names: NA
Gene position: 258087-258452 (Clockwise)
Preceding gene: 117676305
Following gene: 117676309
Centisome position: 92.52
GC content: 42.62
Gene sequence:
>366_bases GTGGCCAAGGCACTGAACTTGATTGGCGATGAATTTAACAGAGCAACCCATGATTGGAACGGTGTTATATCAACGATCAA GTATCAATTATGTAATGGCTTAACGCGGGAAGAGTACAAGGCGACGGTGGGCTCCCTGGTGCCAGCCTATGTTTTCGACC AATCAATTTTGGAATGGTGGAAGCCAAACCCTGAGAACTTCAAATTGATGCTAACAATGGCATTAGAAAAGATGCAAGAA AATTTGAAGTTTATTGAAACACTGTACCAATCAATTCAACAAGTAGAGAAATTTGCCACATGTCAAGCAACCAATAAGAT GACCTTGGGCGCAAGATTAGCGGCATTGAAGCAAAAGGCCGCGTAA
Upstream 100 bases:
>100_bases GCCTTTGTCAGAAAAGCTAAATGAATCAATGTCTTATTTGCAAAGTGGCTAATTCCAACGCTTTTACCGGCCGGACCTCT ACCTGAATGCAAGCAAAATT
Downstream 100 bases:
>100_bases TTTGTTTAATTGGTATTTAGAGGGTGGAGAGTTCAATTGTCACTGGTGTAATAATGGTAATCAACAGAGATATTGATTAC CATTATTAATGTGTCGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAKALNLIGDEFNRATHDWNGVISTIKYQLCNGLTREEYKATVGSLVPAYVFDQSILEWWKPNPENFKLMLTMALEKMQE NLKFIETLYQSIQQVEKFATCQATNKMTLGARLAALKQKAA
Sequences:
>Translated_121_residues MAKALNLIGDEFNRATHDWNGVISTIKYQLCNGLTREEYKATVGSLVPAYVFDQSILEWWKPNPENFKLMLTMALEKMQE NLKFIETLYQSIQQVEKFATCQATNKMTLGARLAALKQKAA >Mature_120_residues AKALNLIGDEFNRATHDWNGVISTIKYQLCNGLTREEYKATVGSLVPAYVFDQSILEWWKPNPENFKLMLTMALEKMQEN LKFIETLYQSIQQVEKFATCQATNKMTLGARLAALKQKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13806; Mature: 13675
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALNLIGDEFNRATHDWNGVISTIKYQLCNGLTREEYKATVGSLVPAYVFDQSILEWW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KPNPENFKLMLTMALEKMQENLKFIETLYQSIQQVEKFATCQATNKMTLGARLAALKQKA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC A C >Mature Secondary Structure AKALNLIGDEFNRATHDWNGVISTIKYQLCNGLTREEYKATVGSLVPAYVFDQSILEWW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KPNPENFKLMLTMALEKMQENLKFIETLYQSIQQVEKFATCQATNKMTLGARLAALKQKA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA