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The map label for this gene is tatD [C]

Identifier: 117676186

GI number: 117676186

Start: 122362

End: 123075

Strand: Reverse

Name: tatD [C]

Synonym: Shewana3_4247

Alternate gene names: 117676186

Gene position: 123075-122362 (Counterclockwise)

Preceding gene: 117676187

Following gene: 117676185

Centisome position: 44.12

GC content: 42.44

Gene sequence:

>714_bases
ATGCATTGCCATCTTGATCTTTATCCCGATCCATTCAAAGTGGCTCAGGAGTGTAAACATCGTGGAACCTACGTGTTATC
CGTGACAACAACTCCCAGGGCCTGGGAAGGCAGTAAGAGGCTTGAAAATAATTACCATCGAATTCGCACTGCTTTAGGCC
TTCATCCGCAAATCGCACATCAAAGATCACATGAGTTAGAACTTTTTGATGCATTACTTTCGGAAGCTAAGTACGTGGGA
GAGATAGGACTCGATGGAAGTAGTGGTTTTAAAGAGCATTGGGACGTTCAGCTAAAGGTATTTCGCCATATACTCAGATC
TGTTAATCATGCAGGCGGACGGATCATGAGCATTCACAGCCGTGCCAGTGCAGTAGAAGTATTGAATGAACTTACTGGTA
TTGACGGTATCCCTGTATTGCACTGGTTTACTGGGACAAAAAGCCAACTAATGAGAGCGATAGATATTGGCTGTTGGTTT
TCAGTTGGGCCAGCAATGCTCAGTACTAAAAAAGGAGTTGAATTTGCTTCAATAATTCCCCGTCACCGTATTCTGACAGA
GACAGATGGACCATTTGCTAAACATTTAACTAAACCACTTTTTCCTTGGGAAGTTGATTTGGCTACTAAGCAGTTAGCGG
AAATTTGGCAGTGTGATGAAGTTGAGGCAAATGCTATGATCATGTCAAATTTTAATTGTTTGGTACGAACGTAA

Upstream 100 bases:

>100_bases
TTCCCGTGTCAGTATTCGAAGATTTTAAAGCCGTCTTTCTGAATGGCCTTGATGAGGTAGAAACCTTCCTGAAAGCAGAA
CGTGTCCTGTGAGCATAGAT

Downstream 100 bases:

>100_bases
AATCTCACGAGACAAAAAGTAATGAGATAAATCTCGTGACGGTGGAGTGTTTTAGATAGCTGTTTTATGACCTATTAGGT
TATATTTTGAACGATTCCAA

Product: TatD-related deoxyribonuclease

Products: NA

Alternate protein names: Mg-Dependent DNAse; Mg-Dependent DNAse TatD; TatD Family Hydrolase; Hydrolase TatD Family; Hydrolase; TatD Related DNAse Family Protein; TatD Family Deoxyribonuclease; Tatd Deoxyribonuclease Family; Magnesium-Dependent DNAse; Hydrolase Of PHP Superfamily

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MHCHLDLYPDPFKVAQECKHRGTYVLSVTTTPRAWEGSKRLENNYHRIRTALGLHPQIAHQRSHELELFDALLSEAKYVG
EIGLDGSSGFKEHWDVQLKVFRHILRSVNHAGGRIMSIHSRASAVEVLNELTGIDGIPVLHWFTGTKSQLMRAIDIGCWF
SVGPAMLSTKKGVEFASIIPRHRILTETDGPFAKHLTKPLFPWEVDLATKQLAEIWQCDEVEANAMIMSNFNCLVRT

Sequences:

>Translated_237_residues
MHCHLDLYPDPFKVAQECKHRGTYVLSVTTTPRAWEGSKRLENNYHRIRTALGLHPQIAHQRSHELELFDALLSEAKYVG
EIGLDGSSGFKEHWDVQLKVFRHILRSVNHAGGRIMSIHSRASAVEVLNELTGIDGIPVLHWFTGTKSQLMRAIDIGCWF
SVGPAMLSTKKGVEFASIIPRHRILTETDGPFAKHLTKPLFPWEVDLATKQLAEIWQCDEVEANAMIMSNFNCLVRT
>Mature_237_residues
MHCHLDLYPDPFKVAQECKHRGTYVLSVTTTPRAWEGSKRLENNYHRIRTALGLHPQIAHQRSHELELFDALLSEAKYVG
EIGLDGSSGFKEHWDVQLKVFRHILRSVNHAGGRIMSIHSRASAVEVLNELTGIDGIPVLHWFTGTKSQLMRAIDIGCWF
SVGPAMLSTKKGVEFASIIPRHRILTETDGPFAKHLTKPLFPWEVDLATKQLAEIWQCDEVEANAMIMSNFNCLVRT

Specific function: Shows DNAse activity [C]

COG id: COG0084

COG function: function code L; Mg-dependent DNase

Gene ontology:

Cell location: Cytoplasmic [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.21.-

Molecular weight: Translated: 26834; Mature: 26834

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCHLDLYPDPFKVAQECKHRGTYVLSVTTTPRAWEGSKRLENNYHRIRTALGLHPQIAH
CEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
QRSHELELFDALLSEAKYVGEIGLDGSSGFKEHWDVQLKVFRHILRSVNHAGGRIMSIHS
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
RASAVEVLNELTGIDGIPVLHWFTGTKSQLMRAIDIGCWFSVGPAMLSTKKGVEFASIIP
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHCCHHHHHHHCCCHHHHHCC
RHRILTETDGPFAKHLTKPLFPWEVDLATKQLAEIWQCDEVEANAMIMSNFNCLVRT
CHHEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEC
>Mature Secondary Structure
MHCHLDLYPDPFKVAQECKHRGTYVLSVTTTPRAWEGSKRLENNYHRIRTALGLHPQIAH
CEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
QRSHELELFDALLSEAKYVGEIGLDGSSGFKEHWDVQLKVFRHILRSVNHAGGRIMSIHS
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
RASAVEVLNELTGIDGIPVLHWFTGTKSQLMRAIDIGCWFSVGPAMLSTKKGVEFASIIP
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHCCHHHHHHHCCCHHHHHCC
RHRILTETDGPFAKHLTKPLFPWEVDLATKQLAEIWQCDEVEANAMIMSNFNCLVRT
CHHEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA