Click here to switch to the map view.

The map label for this gene is 117676187

Identifier: 117676187

GI number: 117676187

Start: 123084

End: 124388

Strand: Reverse

Name: 117676187

Synonym: Shewana3_4248

Alternate gene names: NA

Gene position: 124388-123084 (Counterclockwise)

Preceding gene: 117676188

Following gene: 117676186

Centisome position: 44.59

GC content: 45.13

Gene sequence:

>1305_bases
GTGACACAATTAGTATTTCATCACAACCACCAGTTACTGCCTTCAGCATCCGAAGGGGTATTACCGGTGCAACTATATGG
TTTAAGCGGCCAGATTCGTGGCGATATATCAGTCATCGGAAACCCTGTCATTGAGAAAGTTAAGCGTCTAGGAGTGCGCA
TTTCAAGCCAGACTATGGACTTCCTGACGATTGCGCTTGCGGTAACTGCTGCAGATACCTTTGTTCGCAGATCAGATGCA
GAAGATGGCTGGACTCGCATATTCAAAATGCAATTACCCTTATATGAGCCTGCTAGATGGCTTCCATTGAAAAAGGAACT
GGAGAGAGCTTTACACTTCCTAAGTGGCGACATGTGGGATTTTGAATTTCAATCTGGTGGCTATCCACCTCCAGACCCTT
ATCATAAGCGAGACCGATTCAAGCTAGTGAGCCTAAGAGGTATTGACTCTGTATGCCTTTTCTCTGGTGGTTTAGATTCC
GCCATCGGGGTTATTGATCTATTGAAGGAAGGTCGCTCTCCACTGCTCGTAAGTCACGCTTATAAGGGAGATAAAACACA
CCAAGACCAGATTGCATCTGCGCTTAACGGGCAATATTCTCGGTTTGAGGTCAATGCGGATCCTCACCTGTATACAGGCG
AGACGGATATTACTATGCGAACTCGTAGCCTCAATTTTCTTGCGTTTGCAGCTGTCGGCGCCAGTGCGGTAAAGACAGTT
TCCCAACAAAATGAAATAGACCTTTTTGTGCCTGAGAATGGCTTTATTTCACTAAATGCTCCATTGACGCCACGACGTAT
CGGTACTCTGAGTACTCGAACTACACATCCACATTTTATTGAAAGTATCCAACGGATTTTTGAAGCGGCGGAAATTCCAT
GCCGAATAGTCAATCGCTATCAATTTAAGACTAAAGGTCAGATGGTCACTGAATGTCAAAATAAGCTCTTGCTGGCAAAA
ATAGTGGATAATACGGTCTCGTGTAGTCATTGGAAGCGTTGGAATCAGCAATGCGGAGTATGCGTGCCTTGCATTATTCG
GCGAGCAGCGCTCTATGCCGGAGGAATTAGTGAAAATACAGAATATTCCTTTAATTTCTTAGCTGATGTTTTAAAGGAGA
CGGATCGAAGAGATGACCTTCTTGCCATGCGGATTGCTGTTACACAGAAAACAACTAGGAATGCAGGGGCTTGGATTGCA
GATAGCGGCCCACTTCCCGTGTCAGTATTCGAAGATTTTAAAGCCGTCTTTCTGAATGGCCTTGATGAGGTAGAAACCTT
CCTGAAAGCAGAACGTGTCCTGTGA

Upstream 100 bases:

>100_bases
CTAGGCTTACTGGTAATGTGAGGAGCTTAAGCCGTCAGCAAATGACTCAAATTGAACGTCAGTCCATCATTGACGCATGG
AAGGAATGGGAGGCTTACCT

Downstream 100 bases:

>100_bases
GCATAGATATGCATTGCCATCTTGATCTTTATCCCGATCCATTCAAAGTGGCTCAGGAGTGTAAACATCGTGGAACCTAC
GTGTTATCCGTGACAACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTQLVFHHNHQLLPSASEGVLPVQLYGLSGQIRGDISVIGNPVIEKVKRLGVRISSQTMDFLTIALAVTAADTFVRRSDA
EDGWTRIFKMQLPLYEPARWLPLKKELERALHFLSGDMWDFEFQSGGYPPPDPYHKRDRFKLVSLRGIDSVCLFSGGLDS
AIGVIDLLKEGRSPLLVSHAYKGDKTHQDQIASALNGQYSRFEVNADPHLYTGETDITMRTRSLNFLAFAAVGASAVKTV
SQQNEIDLFVPENGFISLNAPLTPRRIGTLSTRTTHPHFIESIQRIFEAAEIPCRIVNRYQFKTKGQMVTECQNKLLLAK
IVDNTVSCSHWKRWNQQCGVCVPCIIRRAALYAGGISENTEYSFNFLADVLKETDRRDDLLAMRIAVTQKTTRNAGAWIA
DSGPLPVSVFEDFKAVFLNGLDEVETFLKAERVL

Sequences:

>Translated_434_residues
MTQLVFHHNHQLLPSASEGVLPVQLYGLSGQIRGDISVIGNPVIEKVKRLGVRISSQTMDFLTIALAVTAADTFVRRSDA
EDGWTRIFKMQLPLYEPARWLPLKKELERALHFLSGDMWDFEFQSGGYPPPDPYHKRDRFKLVSLRGIDSVCLFSGGLDS
AIGVIDLLKEGRSPLLVSHAYKGDKTHQDQIASALNGQYSRFEVNADPHLYTGETDITMRTRSLNFLAFAAVGASAVKTV
SQQNEIDLFVPENGFISLNAPLTPRRIGTLSTRTTHPHFIESIQRIFEAAEIPCRIVNRYQFKTKGQMVTECQNKLLLAK
IVDNTVSCSHWKRWNQQCGVCVPCIIRRAALYAGGISENTEYSFNFLADVLKETDRRDDLLAMRIAVTQKTTRNAGAWIA
DSGPLPVSVFEDFKAVFLNGLDEVETFLKAERVL
>Mature_433_residues
TQLVFHHNHQLLPSASEGVLPVQLYGLSGQIRGDISVIGNPVIEKVKRLGVRISSQTMDFLTIALAVTAADTFVRRSDAE
DGWTRIFKMQLPLYEPARWLPLKKELERALHFLSGDMWDFEFQSGGYPPPDPYHKRDRFKLVSLRGIDSVCLFSGGLDSA
IGVIDLLKEGRSPLLVSHAYKGDKTHQDQIASALNGQYSRFEVNADPHLYTGETDITMRTRSLNFLAFAAVGASAVKTVS
QQNEIDLFVPENGFISLNAPLTPRRIGTLSTRTTHPHFIESIQRIFEAAEIPCRIVNRYQFKTKGQMVTECQNKLLLAKI
VDNTVSCSHWKRWNQQCGVCVPCIIRRAALYAGGISENTEYSFNFLADVLKETDRRDDLLAMRIAVTQKTTRNAGAWIAD
SGPLPVSVFEDFKAVFLNGLDEVETFLKAERVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48648; Mature: 48517

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLVFHHNHQLLPSASEGVLPVQLYGLSGQIRGDISVIGNPVIEKVKRLGVRISSQTMD
CCEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCEECCCHHHHHHHHHCCEECCHHHH
FLTIALAVTAADTFVRRSDAEDGWTRIFKMQLPLYEPARWLPLKKELERALHFLSGDMWD
HHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
FEFQSGGYPPPDPYHKRDRFKLVSLRGIDSVCLFSGGLDSAIGVIDLLKEGRSPLLVSHA
EEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC
YKGDKTHQDQIASALNGQYSRFEVNADPHLYTGETDITMRTRSLNFLAFAAVGASAVKTV
CCCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCEEEEECCCCEEHHHHHHHHHHHHH
SQQNEIDLFVPENGFISLNAPLTPRRIGTLSTRTTHPHFIESIQRIFEAAEIPCRIVNRY
HCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCE
QFKTKGQMVTECQNKLLLAKIVDNTVSCSHWKRWNQQCGVCVPCIIRRAALYAGGISENT
EECCCCCHHHHHHHHEEEEHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
EYSFNFLADVLKETDRRDDLLAMRIAVTQKTTRNAGAWIADSGPLPVSVFEDFKAVFLNG
CCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHCC
LDEVETFLKAERVL
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TQLVFHHNHQLLPSASEGVLPVQLYGLSGQIRGDISVIGNPVIEKVKRLGVRISSQTMD
CEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCEECCCHHHHHHHHHCCEECCHHHH
FLTIALAVTAADTFVRRSDAEDGWTRIFKMQLPLYEPARWLPLKKELERALHFLSGDMWD
HHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE
FEFQSGGYPPPDPYHKRDRFKLVSLRGIDSVCLFSGGLDSAIGVIDLLKEGRSPLLVSHA
EEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC
YKGDKTHQDQIASALNGQYSRFEVNADPHLYTGETDITMRTRSLNFLAFAAVGASAVKTV
CCCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCEEEEECCCCEEHHHHHHHHHHHHH
SQQNEIDLFVPENGFISLNAPLTPRRIGTLSTRTTHPHFIESIQRIFEAAEIPCRIVNRY
HCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCE
QFKTKGQMVTECQNKLLLAKIVDNTVSCSHWKRWNQQCGVCVPCIIRRAALYAGGISENT
EECCCCCHHHHHHHHEEEEHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
EYSFNFLADVLKETDRRDDLLAMRIAVTQKTTRNAGAWIADSGPLPVSVFEDFKAVFLNG
CCHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHCC
LDEVETFLKAERVL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA