The gene/protein map for NC_008564 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

Click here to switch to the map view.

The map label for this gene is 117621602

Identifier: 117621602

GI number: 117621602

Start: 23444

End: 23638

Strand: Direct

Name: 117621602

Synonym: BAPKO_2031

Alternate gene names: NA

Gene position: 23444-23638 (Clockwise)

Preceding gene: 117621601

Following gene: 117621603

Centisome position: 39.1

GC content: 29.74

Gene sequence:

>195_bases
ATGAGAATGGCCTTTTTACTTTTTTTTTTAATATGGCTTTTTGGTTGTAGTTCTTTTAATGCGCACAATAAAGATTCATT
AGCATCCCATAATAAGGAGAAAACCTCTAATTATAACAGAGAATATTATCAGAGGAACAGAGAAAAACTTAAATTAAGAG
CAAGAGAGCGATATCGTAGAAATAGAAGGAATTAA

Upstream 100 bases:

>100_bases
AGTTGATTATAAAAATGTATTATTTAATAGTTTTGATAATTTAAAAAGACCAATTAGGCATTTTTTATCTATTCAAATTG
TATTTCAAGGAGAGAGAAAT

Downstream 100 bases:

>100_bases
ATTAAATATAAAGAATTAAACTTATTAAAAATTTGAAAGTAATTTTAATATTAAGCAATATATTTAAGTTGATTGGTGAA
TTTATGTAAAAGATAGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRRNRRN

Sequences:

>Translated_64_residues
MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRRNRRN
>Mature_64_residues
MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRRNRRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8047; Mature: 8047

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRR
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NRRN
CCCC
>Mature Secondary Structure
MRMAFLLFFLIWLFGCSSFNAHNKDSLASHNKEKTSNYNREYYQRNREKLKLRARERYRR
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NRRN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA