| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621601
Identifier: 117621601
GI number: 117621601
Start: 22886
End: 23311
Strand: Direct
Name: 117621601
Synonym: BAPKO_2030
Alternate gene names: NA
Gene position: 22886-23311 (Clockwise)
Preceding gene: 117621600
Following gene: 117621602
Centisome position: 38.17
GC content: 27.93
Gene sequence:
>426_bases ATGAAAAACAGATTTTTTTTTATATATTTATCATCAGCTTTAGTTTTTTTGTTTAGCTGTAATGGTTTTTTGACACTTGA AAGCAAAGAAAGATCAAGCTTTACAGATAAACAAAGAATAAGTATTTTAGAGACCATCAAAAACCACTATAATGGCGACT CTGAAAAAATAGCTAGAGTTGACAAATATTTTGATCGATTAGAGGATTCTCAAAAAGATGTTTTTTTACAATTGTTTTCG GCTGGATTTGACTATATAAACTCTAAAGAATCAGAACCTAAAGAATCAGCAAATAGAAGAGCTAATTTAGATGCTTTAAA AAGTAATTTTGAATCCAAACTAAAACAGCTTAATTACACAGAAGAAGATTTTAATAAATTGGTAGACGACTTTAATGAGT TTGTTGATTCTAAGTCCACTTCTTAG
Upstream 100 bases:
>100_bases AAAATCTTTGAAAAATTAATTTTTAATTTAATTGTTTGGTAAATTTTATTTACATGAATTATAATTGAATTTCTATAAAT TCTTATTTTAAGGAGTTGTT
Downstream 100 bases:
>100_bases CAGAATATATTTAATTTAAGAAAATTTAAACAAGTTGATTATAAAAATGTATTATTTAATAGTTTTGATAATTTAAAAAG ACCAATTAGGCATTTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKNRFFFIYLSSALVFLFSCNGFLTLESKERSSFTDKQRISILETIKNHYNGDSEKIARVDKYFDRLEDSQKDVFLQLFS AGFDYINSKESEPKESANRRANLDALKSNFESKLKQLNYTEEDFNKLVDDFNEFVDSKSTS
Sequences:
>Translated_141_residues MKNRFFFIYLSSALVFLFSCNGFLTLESKERSSFTDKQRISILETIKNHYNGDSEKIARVDKYFDRLEDSQKDVFLQLFS AGFDYINSKESEPKESANRRANLDALKSNFESKLKQLNYTEEDFNKLVDDFNEFVDSKSTS >Mature_141_residues MKNRFFFIYLSSALVFLFSCNGFLTLESKERSSFTDKQRISILETIKNHYNGDSEKIARVDKYFDRLEDSQKDVFLQLFS AGFDYINSKESEPKESANRRANLDALKSNFESKLKQLNYTEEDFNKLVDDFNEFVDSKSTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16525; Mature: 16525
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRFFFIYLSSALVFLFSCNGFLTLESKERSSFTDKQRISILETIKNHYNGDSEKIARV CCCCEEEEEHHHHHHHHHHCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH DKYFDRLEDSQKDVFLQLFSAGFDYINSKESEPKESANRRANLDALKSNFESKLKQLNYT HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCC EEDFNKLVDDFNEFVDSKSTS HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKNRFFFIYLSSALVFLFSCNGFLTLESKERSSFTDKQRISILETIKNHYNGDSEKIARV CCCCEEEEEHHHHHHHHHHCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH DKYFDRLEDSQKDVFLQLFSAGFDYINSKESEPKESANRRANLDALKSNFESKLKQLNYT HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCC EEDFNKLVDDFNEFVDSKSTS HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA