| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621603
Identifier: 117621603
GI number: 117621603
Start: 23801
End: 24340
Strand: Direct
Name: 117621603
Synonym: BAPKO_2032
Alternate gene names: NA
Gene position: 23801-24340 (Clockwise)
Preceding gene: 117621602
Following gene: 117621605
Centisome position: 39.7
GC content: 22.96
Gene sequence:
>540_bases ATGAAGAGATATATTTATGTGTATATATTGGTAATAATAGTAAATTCTTGTTATTTAAATGATTTTTCTAGTATGAATAA AAGTAGCCTTAATAAATATGATTTAAATTTTAATAAACTTTCTTTACCGAAAGAGAAAGGTGCTATTTTAAAAGTTCAAA GAAAATTTAAAAGTCTTACTGATAAAATAAGCTCTAGAATTTCTAATTATAATGAGATTAAGGTTAGTAATTTCTTTAAC GAATCTAATGAACAAAAAATTAATCTTTTAAATAAAATATTAGAGATTTTAAAAGTACAGCACGGTTTAATGGAAAAAAG TAGTAATAGTATAAGCAAACTTAACATGTCAAGTGGAGGTAATTATACTGTTTTTGATCCACAGCCAGAATTACGACTTT TAAATCAAAAATATTCAGATATAGATGAAAAATTAAAAGAAATATGCAATTACATTCTTAGTAACAATGTTGACTTTAAT GAGGTTTTAAAAGATCTAACTTCTTTAAAAGAGAGCTCTTTAGCACTAATGCAAAAATAA
Upstream 100 bases:
>100_bases TTTAAGTTGATTGGTGAATTTATGTAAAAGATAGATGTGTTAAATATTTAGAATATTTTATGGTTTTGAAATAAATTGAA TTTTAATTAGGAGAATATAC
Downstream 100 bases:
>100_bases GTTTTAATTTATTAATTTTTAAAGGCTCATTTTTAAAAAACCTTTAAAAAAATAGAGCCATTTTTTTGACTCTATTTTTT AAAAATCATTTAATCTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKRYIYVYILVIIVNSCYLNDFSSMNKSSLNKYDLNFNKLSLPKEKGAILKVQRKFKSLTDKISSRISNYNEIKVSNFFN ESNEQKINLLNKILEILKVQHGLMEKSSNSISKLNMSSGGNYTVFDPQPELRLLNQKYSDIDEKLKEICNYILSNNVDFN EVLKDLTSLKESSLALMQK
Sequences:
>Translated_179_residues MKRYIYVYILVIIVNSCYLNDFSSMNKSSLNKYDLNFNKLSLPKEKGAILKVQRKFKSLTDKISSRISNYNEIKVSNFFN ESNEQKINLLNKILEILKVQHGLMEKSSNSISKLNMSSGGNYTVFDPQPELRLLNQKYSDIDEKLKEICNYILSNNVDFN EVLKDLTSLKESSLALMQK >Mature_179_residues MKRYIYVYILVIIVNSCYLNDFSSMNKSSLNKYDLNFNKLSLPKEKGAILKVQRKFKSLTDKISSRISNYNEIKVSNFFN ESNEQKINLLNKILEILKVQHGLMEKSSNSISKLNMSSGGNYTVFDPQPELRLLNQKYSDIDEKLKEICNYILSNNVDFN EVLKDLTSLKESSLALMQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20740; Mature: 20740
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYIYVYILVIIVNSCYLNDFSSMNKSSLNKYDLNFNKLSLPKEKGAILKVQRKFKSLT CCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DKISSRISNYNEIKVSNFFNESNEQKINLLNKILEILKVQHGLMEKSSNSISKLNMSSGG HHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCC NYTVFDPQPELRLLNQKYSDIDEKLKEICNYILSNNVDFNEVLKDLTSLKESSLALMQK CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRYIYVYILVIIVNSCYLNDFSSMNKSSLNKYDLNFNKLSLPKEKGAILKVQRKFKSLT CCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DKISSRISNYNEIKVSNFFNESNEQKINLLNKILEILKVQHGLMEKSSNSISKLNMSSGG HHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCC NYTVFDPQPELRLLNQKYSDIDEKLKEICNYILSNNVDFNEVLKDLTSLKESSLALMQK CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA