| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872875
Identifier: 116872875
GI number: 116872875
Start: 1456561
End: 1456887
Strand: Direct
Name: 116872875
Synonym: lwe1459
Alternate gene names: NA
Gene position: 1456561-1456887 (Clockwise)
Preceding gene: 116872874
Following gene: 116872892
Centisome position: 51.76
GC content: 34.56
Gene sequence:
>327_bases ATGGCGATAAGTACTTATACATTACTCGTAATTCTAGGGTGTGGCCTAGTCACATTCATACCACGTATCTTACCATTTAT TTTCGTTCGCAAATTGCAGTTACCGGATATCGTGATTCGTTATTTGTCTTATGTCCCTCTTTGTATATTAACTGCACTGT TTGTTCAAAGTCTTTTAATCACTCGCACTAATGACTTTCCAACCGTTAACATAGAAAATTTGCTGGCTTCATTACCAACT ATTTTAACAGCCATTTTAACTAAAAATTTAATGTGGATTGTTATTGTTGGGATTATTTCAATGGCTTTAATACGCTTCAT CGCATAG
Upstream 100 bases:
>100_bases TAGCTATATTTTTAATTCTATTTATGCGTGTGATGACACCTGAACTTGCTATATTGGTTTCGACGTTACTTGGATGTCTG ATGGGAGTGATAGTAGAAAA
Downstream 100 bases:
>100_bases AAAAGCCCTTTACTGGAGTGTGTTTTTGACGGGAATCAAAACCAGTAAAGGGCTTTTTAATTATGGATAACTCCGAAGTA ATATTAATTAGATGTTGAAG
Product: transmembrane protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Transport; Branched-Chain Amino Acid Transporter AzlD; Transmembrane Protein; Azaleucine Resistance Protein AzlD; Branched-Chain Amino Acid Transporter; Ypothetical Protein SMU.; Integral Membrane Protein; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAISTYTLLVILGCGLVTFIPRILPFIFVRKLQLPDIVIRYLSYVPLCILTALFVQSLLITRTNDFPTVNIENLLASLPT ILTAILTKNLMWIVIVGIISMALIRFIA
Sequences:
>Translated_108_residues MAISTYTLLVILGCGLVTFIPRILPFIFVRKLQLPDIVIRYLSYVPLCILTALFVQSLLITRTNDFPTVNIENLLASLPT ILTAILTKNLMWIVIVGIISMALIRFIA >Mature_107_residues AISTYTLLVILGCGLVTFIPRILPFIFVRKLQLPDIVIRYLSYVPLCILTALFVQSLLITRTNDFPTVNIENLLASLPTI LTAILTKNLMWIVIVGIISMALIRFIA
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12105; Mature: 11974
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISTYTLLVILGCGLVTFIPRILPFIFVRKLQLPDIVIRYLSYVPLCILTALFVQSLLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRTNDFPTVNIENLLASLPTILTAILTKNLMWIVIVGIISMALIRFIA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AISTYTLLVILGCGLVTFIPRILPFIFVRKLQLPDIVIRYLSYVPLCILTALFVQSLLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRTNDFPTVNIENLLASLPTILTAILTKNLMWIVIVGIISMALIRFIA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA