| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872892
Identifier: 116872892
GI number: 116872892
Start: 1474111
End: 1474731
Strand: Direct
Name: 116872892
Synonym: lwe1476
Alternate gene names: NA
Gene position: 1474111-1474731 (Clockwise)
Preceding gene: 116872875
Following gene: 116872909
Centisome position: 52.38
GC content: 32.37
Gene sequence:
>621_bases ATGAATATGTTAATTGCATTATTAGTTGGCTTATTTCTACTCACATTCATAGGTGTAGTTGTGGGGATTGTATTACTTAT TGTAAGAAAGGAAAAATGGGCCGGTATTATTGTTGCCGGATTATCGCTTGGCATTGGATTTTGCATTATGATAGCTGGTT TAAACTTAGTAACGACAAACTTGCTTCAAACATTCAGTAATCCATTTTCTTTTTCGAGTTATGGAAATGGTTTAGATAAC TATTCTGATGATTACTCACAAGGTGATGATACAGAGAGTTTAGATGATTATATAGACGTTAGTTACGGTGAAGAAGTAAT CTTAGAGGATGAAAGTTCTATCACTATCTCCAAACCGGAAATGTATCGTGAAAAAGCTGATTATGATGTTTATAAAGTAC GAGTTAAATTTGAAAATACGAGTAATGACACAGTTTCATTTTCTTCTGATGATGTTAGCTTATATGATAATGCAGACGAA GAATACGGGGAACAAATAACTGAAAAAAGTTTTTCAGGAGATGTTCAACCTGGCGAAACAAAAGAACTTGTACTCTATTA TGAAGTTTATAATTTTGGACCATATGATGTAGAGTATGATAATTATAACTGGACAGAATAA
Upstream 100 bases:
>100_bases TTTTCTAAATGAAAATGTCTTTTTATATTTATTGCTATCTTTCCTTCCTCACCTATTGTAAAATAAAGAAAAAGACGAGA TGGAAGGGAATTTTGTTGCT
Downstream 100 bases:
>100_bases TGAAAAGCATCTGGCGTTTGCCAGATGCTTTTCTTAATATTCTTCTCTATCGAATCCATAGTCATGTAAGTAATGTTCTT TATCTCGCCAATTTTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNMLIALLVGLFLLTFIGVVVGIVLLIVRKEKWAGIIVAGLSLGIGFCIMIAGLNLVTTNLLQTFSNPFSFSSYGNGLDN YSDDYSQGDDTESLDDYIDVSYGEEVILEDESSITISKPEMYREKADYDVYKVRVKFENTSNDTVSFSSDDVSLYDNADE EYGEQITEKSFSGDVQPGETKELVLYYEVYNFGPYDVEYDNYNWTE
Sequences:
>Translated_206_residues MNMLIALLVGLFLLTFIGVVVGIVLLIVRKEKWAGIIVAGLSLGIGFCIMIAGLNLVTTNLLQTFSNPFSFSSYGNGLDN YSDDYSQGDDTESLDDYIDVSYGEEVILEDESSITISKPEMYREKADYDVYKVRVKFENTSNDTVSFSSDDVSLYDNADE EYGEQITEKSFSGDVQPGETKELVLYYEVYNFGPYDVEYDNYNWTE >Mature_206_residues MNMLIALLVGLFLLTFIGVVVGIVLLIVRKEKWAGIIVAGLSLGIGFCIMIAGLNLVTTNLLQTFSNPFSFSSYGNGLDN YSDDYSQGDDTESLDDYIDVSYGEEVILEDESSITISKPEMYREKADYDVYKVRVKFENTSNDTVSFSSDDVSLYDNADE EYGEQITEKSFSGDVQPGETKELVLYYEVYNFGPYDVEYDNYNWTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23213; Mature: 23213
Theoretical pI: Translated: 3.65; Mature: 3.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMLIALLVGLFLLTFIGVVVGIVLLIVRKEKWAGIIVAGLSLGIGFCIMIAGLNLVTTN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH LLQTFSNPFSFSSYGNGLDNYSDDYSQGDDTESLDDYIDVSYGEEVILEDESSITISKPE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCEEEECHH MYREKADYDVYKVRVKFENTSNDTVSFSSDDVSLYDNADEEYGEQITEKSFSGDVQPGET HHHHHCCCEEEEEEEEEECCCCCEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCC KELVLYYEVYNFGPYDVEYDNYNWTE CEEEEEEEEECCCCCCEEECCCCCCC >Mature Secondary Structure MNMLIALLVGLFLLTFIGVVVGIVLLIVRKEKWAGIIVAGLSLGIGFCIMIAGLNLVTTN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH LLQTFSNPFSFSSYGNGLDNYSDDYSQGDDTESLDDYIDVSYGEEVILEDESSITISKPE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCEEEECHH MYREKADYDVYKVRVKFENTSNDTVSFSSDDVSLYDNADEEYGEQITEKSFSGDVQPGET HHHHHCCCEEEEEEEEEECCCCCEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCC KELVLYYEVYNFGPYDVEYDNYNWTE CEEEEEEEEECCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA