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The map label for this gene is ygaZ [H]

Identifier: 116872874

GI number: 116872874

Start: 1455863

End: 1456570

Strand: Direct

Name: ygaZ [H]

Synonym: lwe1458

Alternate gene names: 116872874

Gene position: 1455863-1456570 (Clockwise)

Preceding gene: 116872873

Following gene: 116872875

Centisome position: 51.73

GC content: 35.88

Gene sequence:

>708_bases
ATGGAAAAGAAAGTAGAGCTAAGTTTTTATGATGGAGTTAAAGCATGTTTACCAACTGTGCTTGGCTATGTTGGTATTGG
AATTGCTGCTGGTGTTGTGAGCAAAGCTTCTCATTTAAGTGTCTTAGAAGTTACACTGCTTGCAATTATTGTCTATGCAG
GAGCTGCCCAATTTATTATTTCTGGATTATTACTTTTACAGAGTCCGATTTCAGCTATTATTTTTACTACTTTCTTAATT
AATTCTAGGCATTTTTTGATGAGTATGGCGGAAGCTCCTTATTTTAAGAAATACTCACTTTGGAATAATATTGGGATTGG
CGCCCTTCTTACAGATGAAACATTTGGTGTATCAATGAATCAGATTGGTAATAAAAAACCAGTTAGTGCGAAATGGATGC
ATGGTATTAATGTGACCGCTTATTTGGCTTGGATTATAGCTTGCATCATTGGCGCATTTGTTGGCAATTGGTTGCCTAAT
CCTGAACAATTCGGGCTTGACTTCGCTCTAACAGCGATGTTTATTGGTTTGCTTTATTTGCAAGTTGTGAGTGATAAAAG
TAAAAGAATCGCTACAAGTTTATTTGTTATGTTGATGGTAGCTATATTTTTAATTCTATTTATGCGTGTGATGACACCTG
AACTTGCTATATTGGTTTCGACGTTACTTGGATGTCTGATGGGAGTGATAGTAGAAAAATGGCGATAA

Upstream 100 bases:

>100_bases
TGATTTTACGAGGGAAAAATGGTATGATAAAAAAATATTATTCTTTGATTGCTCGTGTTTTAGATTGGAGTATGGACTCC
TAATAAGGAGGAATTTTCTT

Downstream 100 bases:

>100_bases
GTACTTATACATTACTCGTAATTCTAGGGTGTGGCCTAGTCACATTCATACCACGTATCTTACCATTTATTTTCGTTCGC
AAATTGCAGTTACCGGATAT

Product: AzlC family branched-chain amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MEKKVELSFYDGVKACLPTVLGYVGIGIAAGVVSKASHLSVLEVTLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLI
NSRHFLMSMAEAPYFKKYSLWNNIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIIACIIGAFVGNWLPN
PEQFGLDFALTAMFIGLLYLQVVSDKSKRIATSLFVMLMVAIFLILFMRVMTPELAILVSTLLGCLMGVIVEKWR

Sequences:

>Translated_235_residues
MEKKVELSFYDGVKACLPTVLGYVGIGIAAGVVSKASHLSVLEVTLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLI
NSRHFLMSMAEAPYFKKYSLWNNIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIIACIIGAFVGNWLPN
PEQFGLDFALTAMFIGLLYLQVVSDKSKRIATSLFVMLMVAIFLILFMRVMTPELAILVSTLLGCLMGVIVEKWR
>Mature_235_residues
MEKKVELSFYDGVKACLPTVLGYVGIGIAAGVVSKASHLSVLEVTLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLI
NSRHFLMSMAEAPYFKKYSLWNNIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIIACIIGAFVGNWLPN
PEQFGLDFALTAMFIGLLYLQVVSDKSKRIATSLFVMLMVAIFLILFMRVMTPELAILVSTLLGCLMGVIVEKWR

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=240, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25720; Mature: 25720

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKVELSFYDGVKACLPTVLGYVGIGIAAGVVSKASHLSVLEVTLLAIIVYAGAAQFII
CCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLLLLQSPISAIIFTTFLINSRHFLMSMAEAPYFKKYSLWNNIGIGALLTDETFGVSMN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCCHH
QIGNKKPVSAKWMHGINVTAYLAWIIACIIGAFVGNWLPNPEQFGLDFALTAMFIGLLYL
HCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHH
QVVSDKSKRIATSLFVMLMVAIFLILFMRVMTPELAILVSTLLGCLMGVIVEKWR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKKVELSFYDGVKACLPTVLGYVGIGIAAGVVSKASHLSVLEVTLLAIIVYAGAAQFII
CCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLLLLQSPISAIIFTTFLINSRHFLMSMAEAPYFKKYSLWNNIGIGALLTDETFGVSMN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCCHH
QIGNKKPVSAKWMHGINVTAYLAWIIACIIGAFVGNWLPNPEQFGLDFALTAMFIGLLYL
HCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHH
QVVSDKSKRIATSLFVMLMVAIFLILFMRVMTPELAILVSTLLGCLMGVIVEKWR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]