Click here to switch to the map view.

The map label for this gene is yqjE [H]

Identifier: 116872807

GI number: 116872807

Start: 1378638

End: 1379732

Strand: Direct

Name: yqjE [H]

Synonym: lwe1391

Alternate gene names: 116872807

Gene position: 1378638-1379732 (Clockwise)

Preceding gene: 116872805

Following gene: 116872808

Centisome position: 48.99

GC content: 33.97

Gene sequence:

>1095_bases
ATGAAATCAAATGTAAAAAATTACTTTACGGACTTAATCCAAATACCGTCTGTTTCTGGAAAAGAAAAAGCAGTATTAAT
GTACATTAAAAAACATTTAACGCAAGCAAATATCGCTTATAGTTTAGATGAAAATTACGGATTAATTGCTCGATTACCAG
CAACTGCTGAAAAATTTCCAACCATTTTTTTCTGTAGCCATGTGGATACACACCCAAATGCTTCTGCTCCAGTTTTTCAA
ATTGATCATGATCACATTACTTCGAAAAATGGAACCTCATTAGGAGCAGATGATAAAGCAGCAGTAGCGGCAATGTTAGC
GAGCATCGATTATTTTAATGAAGAAAAGAGTGTTCATGGTATAATTGAGTTTATTTTTACGACGAAAGAAGAACTGGGTA
TGATGGGAATGCGTTTATTTCCTGAAGAAAAAATTACTGCGGCATATGGATATTGTTTAGATGCTCCATTTGATGTTGGT
AATTATCAATTGCAATCTAACACTTTAGTAGCGGTTAATTTTGCAATTGCTAGTTCAGATTCTTCACAAATGTCACCAAT
TTCTGTCGCTAGAATGGCTCTCCATGCAACCCGTCCAGGACGAATTGATCGAGAAAACAAATGGGAAGTCGAATCTTTTT
CTGGTGGCATCAATGATGAAAATTACCAAGATGCGCAATTAGATATTCTTTTTACATCAGCTGCTAGTTTTAGAAAAGCA
TTATTGCATATTCAAGCCATAAGAGAGCAGTTTAACGAAACATGTGAAAAATATGGTGCTTCTTTAACAGATGATACTCG
TCTTATTTATGAAGGTTATCATATTGATCCAAAACACCCATTAGTAAATATTTTCCGAAAAGCAGCCAAAAAACAAGCTT
TGCCAACAAATGAAATTTTTATTGATGGCGGTTCAGATGCGAATGTTCTTAATGAAAAAGGAATACCTACAATGCTATTA
TCAGCAGGATATAAGAATGCGCATACAGAAGGAGAATCTATTGCCGTAAGTCAGTTAGAAAAGCTTACACAACTCATCAT
TGATTTATCCGAATCAGCTAAAAATGAAAAAATCTTATTAAGAAAGCTAAAATAA

Upstream 100 bases:

>100_bases
TAAAGCATTTCAGTTATCTCCATCTTACTTATTATTAGAGTAAATTTCAAGTGATTTTTTAATTTTTTTAAGTAAAAGGA
AGAATATAGGTGAAAATAAG

Downstream 100 bases:

>100_bases
CGAAAAAAAGTCAAATAATTCGGATTGATTCATTGTCCAAGAAGCAATTCTTTGATATAGTAAATGATGTTGATACTTTT
ATGTGTCATGTTGAAGTAAG

Product: M20B family metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKSNVKNYFTDLIQIPSVSGKEKAVLMYIKKHLTQANIAYSLDENYGLIARLPATAEKFPTIFFCSHVDTHPNASAPVFQ
IDHDHITSKNGTSLGADDKAAVAAMLASIDYFNEEKSVHGIIEFIFTTKEELGMMGMRLFPEEKITAAYGYCLDAPFDVG
NYQLQSNTLVAVNFAIASSDSSQMSPISVARMALHATRPGRIDRENKWEVESFSGGINDENYQDAQLDILFTSAASFRKA
LLHIQAIREQFNETCEKYGASLTDDTRLIYEGYHIDPKHPLVNIFRKAAKKQALPTNEIFIDGGSDANVLNEKGIPTMLL
SAGYKNAHTEGESIAVSQLEKLTQLIIDLSESAKNEKILLRKLK

Sequences:

>Translated_364_residues
MKSNVKNYFTDLIQIPSVSGKEKAVLMYIKKHLTQANIAYSLDENYGLIARLPATAEKFPTIFFCSHVDTHPNASAPVFQ
IDHDHITSKNGTSLGADDKAAVAAMLASIDYFNEEKSVHGIIEFIFTTKEELGMMGMRLFPEEKITAAYGYCLDAPFDVG
NYQLQSNTLVAVNFAIASSDSSQMSPISVARMALHATRPGRIDRENKWEVESFSGGINDENYQDAQLDILFTSAASFRKA
LLHIQAIREQFNETCEKYGASLTDDTRLIYEGYHIDPKHPLVNIFRKAAKKQALPTNEIFIDGGSDANVLNEKGIPTMLL
SAGYKNAHTEGESIAVSQLEKLTQLIIDLSESAKNEKILLRKLK
>Mature_364_residues
MKSNVKNYFTDLIQIPSVSGKEKAVLMYIKKHLTQANIAYSLDENYGLIARLPATAEKFPTIFFCSHVDTHPNASAPVFQ
IDHDHITSKNGTSLGADDKAAVAAMLASIDYFNEEKSVHGIIEFIFTTKEELGMMGMRLFPEEKITAAYGYCLDAPFDVG
NYQLQSNTLVAVNFAIASSDSSQMSPISVARMALHATRPGRIDRENKWEVESFSGGINDENYQDAQLDILFTSAASFRKA
LLHIQAIREQFNETCEKYGASLTDDTRLIYEGYHIDPKHPLVNIFRKAAKKQALPTNEIFIDGGSDANVLNEKGIPTMLL
SAGYKNAHTEGESIAVSQLEKLTQLIIDLSESAKNEKILLRKLK

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=394, Percent_Identity=26.3959390862944, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 40409; Mature: 40409

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNVKNYFTDLIQIPSVSGKEKAVLMYIKKHLTQANIAYSLDENYGLIARLPATAEKFP
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHCC
TIFFCSHVDTHPNASAPVFQIDHDHITSKNGTSLGADDKAAVAAMLASIDYFNEEKSVHG
EEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
IIEFIFTTKEELGMMGMRLFPEEKITAAYGYCLDAPFDVGNYQLQSNTLVAVNFAIASSD
HHHHHHHCHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCEEEECCEEEEEEEEEECCC
SSQMSPISVARMALHATRPGRIDRENKWEVESFSGGINDENYQDAQLDILFTSAASFRKA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECHHHHHHH
LLHIQAIREQFNETCEKYGASLTDDTRLIYEGYHIDPKHPLVNIFRKAAKKQALPTNEIF
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEECCCCCHHHHHHHHHHHHHCCCCCEEE
IDGGSDANVLNEKGIPTMLLSAGYKNAHTEGESIAVSQLEKLTQLIIDLSESAKNEKILL
EECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RKLK
EECC
>Mature Secondary Structure
MKSNVKNYFTDLIQIPSVSGKEKAVLMYIKKHLTQANIAYSLDENYGLIARLPATAEKFP
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHCC
TIFFCSHVDTHPNASAPVFQIDHDHITSKNGTSLGADDKAAVAAMLASIDYFNEEKSVHG
EEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
IIEFIFTTKEELGMMGMRLFPEEKITAAYGYCLDAPFDVGNYQLQSNTLVAVNFAIASSD
HHHHHHHCHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCEEEECCEEEEEEEEEECCC
SSQMSPISVARMALHATRPGRIDRENKWEVESFSGGINDENYQDAQLDILFTSAASFRKA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECHHHHHHH
LLHIQAIREQFNETCEKYGASLTDDTRLIYEGYHIDPKHPLVNIFRKAAKKQALPTNEIF
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEECCCCCHHHHHHHHHHHHHCCCCCEEE
IDGGSDANVLNEKGIPTMLLSAGYKNAHTEGESIAVSQLEKLTQLIIDLSESAKNEKILL
EECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RKLK
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]