| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is gluP [H]
Identifier: 116872768
GI number: 116872768
Start: 1343501
End: 1345039
Strand: Direct
Name: gluP [H]
Synonym: lwe1352
Alternate gene names: 116872768
Gene position: 1343501-1345039 (Clockwise)
Preceding gene: 116872767
Following gene: 116872769
Centisome position: 47.74
GC content: 34.18
Gene sequence:
>1539_bases TTGAGCTTCCAAGAACAATATATCTTCTGGCGCCTAACTAACTATTTCTTGGGTGTTGAAAAATACCGTTTAATCCATCT TCATGAGGAAAAACAAGAACTTTGGTTAGAAAACAACAGTCAGAAAAAAAGACCAGTCATCCGTATTCAGATGAAAGAAT TAAGTTGGGCTAATGTAGTGGAACGTGATGTTAACCACACATTACATGTAACAGAAAACCTTCGTAAGCAAATGGGGCGA CTTAAATTGCCGCTTATTAATATTTATATAACACCTTTTGAACCAATGGGTGATATTTCGCCTTTTTTTGGAGAGCCAAT CACTTCTCCAAATGAAAAGGTTAAATTAGAAAATATTTTACTTGCAAACGAGCAAATGAATGAACATCTAGATACTCTTG TGAAACGTTTGGAGTTACCAGAATCTGAATTTATTCTTCCAAATGAAATAACTAAAGATATGGTAACAAAAGAAAGAGAA CAAGTGATTACTTATATTACTTCTAAAGTAAACGAAGAACAAAAAGTTGCGAGAAATTCAAAGCCAATTGTTACATATAG TTTTATTGGTCTTATAATTGCAGCGTTTTTATGGATAGCTTTGCAGGGTGGAAGCACAAACACCTTCAACTTAATAAAAT GGGGCGGGAAATTTAACCCTCTCATTTATGCAGGTGAATGGTGGCGCTTTATTTCACCGATATTTCTTCATAGCGGCTTA ATGCACTTAGCTTCGAATGCGGTTATGCTATATATAGTTGGTGCTTGGGCAGAACGTATTTATGGCAAATGGCGATATAT TTTAATCTTACTATTAGGTGGGATTTGTGGTAATATAGCTAGTTTTGCATTAAATATGAATCTCTCTGTTGGAGCAAGTA CAGCAGTATTTGCTGTGATGGGTGCGTTGCTATACTTAGTAGTTTTAAAACCAAATCTTTATGCCAAAACAATTGGTGTT AGTATTGCTTCACTTGTTGCTGTAAATTTATTTATTGATCTATTTTCTACACAAATAGACATAGCAGGACACATTGGTGG TTTGGTCGGTGGGTTTTTATTAGCAGGAGCTCTTTCCTTACCAAAACAATTTTTCCACTGGCGACGTTTTGCATATGGAA TATCATTAATTGCTGTAACAATTTTATTTTTATACTTCGGTTTCCAAAAAGGAATGCAACCATATGATCCGATGCAAGCT AATGTTGCCGTTCAACAATACTTACAAGATAACAACAAAAAAGAAGCAAGTAAGATTATTGATACTTTAATTGAAAGTAG AAGTGCTGATGCTTATTCTTATACTTACGCCTCATCTATCGCGCTTCAAGATAAGCAAGTAGATAAAGCAGAACAAATGG CAAAAGAAGCCATCAGTATTGACAAGGATATTCCAGAAGCACATTATTATCTAGCTGTTTGTTATCAATTAAAAGGTGAT ACAAAAGCAGCTATAAAAGAAGCAGATATGGCGAAACAATTATCAAGCGAACCATTTTTTGATTCTTATTATAATGAACT AGAAAAAACCAAGGAATAA
Upstream 100 bases:
>100_bases AAAGAAAAATATTTCAAGAGAATACAGGGTGGATTGTTTACAACGCCCCTTTTTTTGCGTATAGTAGTAATTATAATTTG TAATGAAAGCAGGGAATTTT
Downstream 100 bases:
>100_bases GAGGTTTTTAATATGAAAACAGTATATGATGTTGCTCAGTTGTTAAGAAAGCATGGAATTATTGTTTATTTAGGAAAAAG ACAATATGATATCGAAATGA
Product: rhomboid family membrane protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSFQEQYIFWRLTNYFLGVEKYRLIHLHEEKQELWLENNSQKKRPVIRIQMKELSWANVVERDVNHTLHVTENLRKQMGR LKLPLINIYITPFEPMGDISPFFGEPITSPNEKVKLENILLANEQMNEHLDTLVKRLELPESEFILPNEITKDMVTKERE QVITYITSKVNEEQKVARNSKPIVTYSFIGLIIAAFLWIALQGGSTNTFNLIKWGGKFNPLIYAGEWWRFISPIFLHSGL MHLASNAVMLYIVGAWAERIYGKWRYILILLLGGICGNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGV SIASLVAVNLFIDLFSTQIDIAGHIGGLVGGFLLAGALSLPKQFFHWRRFAYGISLIAVTILFLYFGFQKGMQPYDPMQA NVAVQQYLQDNNKKEASKIIDTLIESRSADAYSYTYASSIALQDKQVDKAEQMAKEAISIDKDIPEAHYYLAVCYQLKGD TKAAIKEADMAKQLSSEPFFDSYYNELEKTKE
Sequences:
>Translated_512_residues MSFQEQYIFWRLTNYFLGVEKYRLIHLHEEKQELWLENNSQKKRPVIRIQMKELSWANVVERDVNHTLHVTENLRKQMGR LKLPLINIYITPFEPMGDISPFFGEPITSPNEKVKLENILLANEQMNEHLDTLVKRLELPESEFILPNEITKDMVTKERE QVITYITSKVNEEQKVARNSKPIVTYSFIGLIIAAFLWIALQGGSTNTFNLIKWGGKFNPLIYAGEWWRFISPIFLHSGL MHLASNAVMLYIVGAWAERIYGKWRYILILLLGGICGNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGV SIASLVAVNLFIDLFSTQIDIAGHIGGLVGGFLLAGALSLPKQFFHWRRFAYGISLIAVTILFLYFGFQKGMQPYDPMQA NVAVQQYLQDNNKKEASKIIDTLIESRSADAYSYTYASSIALQDKQVDKAEQMAKEAISIDKDIPEAHYYLAVCYQLKGD TKAAIKEADMAKQLSSEPFFDSYYNELEKTKE >Mature_511_residues SFQEQYIFWRLTNYFLGVEKYRLIHLHEEKQELWLENNSQKKRPVIRIQMKELSWANVVERDVNHTLHVTENLRKQMGRL KLPLINIYITPFEPMGDISPFFGEPITSPNEKVKLENILLANEQMNEHLDTLVKRLELPESEFILPNEITKDMVTKEREQ VITYITSKVNEEQKVARNSKPIVTYSFIGLIIAAFLWIALQGGSTNTFNLIKWGGKFNPLIYAGEWWRFISPIFLHSGLM HLASNAVMLYIVGAWAERIYGKWRYILILLLGGICGNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVS IASLVAVNLFIDLFSTQIDIAGHIGGLVGGFLLAGALSLPKQFFHWRRFAYGISLIAVTILFLYFGFQKGMQPYDPMQAN VAVQQYLQDNNKKEASKIIDTLIESRSADAYSYTYASSIALQDKQVDKAEQMAKEAISIDKDIPEAHYYLAVCYQLKGDT KAAIKEADMAKQLSSEPFFDSYYNELEKTKE
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 58309; Mature: 58178
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQEQYIFWRLTNYFLGVEKYRLIHLHEEKQELWLENNSQKKRPVIRIQMKELSWANVV CCCCHHHHHHHHHHHHHCHHHEEEEEEECHHHHHHCCCCCCCCCCEEEEEEHHCHHHHHH ERDVNHTLHVTENLRKQMGRLKLPLINIYITPFEPMGDISPFFGEPITSPNEKVKLENIL HHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHE LANEQMNEHLDTLVKRLELPESEFILPNEITKDMVTKEREQVITYITSKVNEEQKVARNS ECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC KPIVTYSFIGLIIAAFLWIALQGGSTNTFNLIKWGGKFNPLIYAGEWWRFISPIFLHSGL CCEEHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHHHHH MHLASNAVMLYIVGAWAERIYGKWRYILILLLGGICGNIASFALNMNLSVGASTAVFAVM HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHH GALLYLVVLKPNLYAKTIGVSIASLVAVNLFIDLFSTQIDIAGHIGGLVGGFLLAGALSL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKQFFHWRRFAYGISLIAVTILFLYFGFQKGMQPYDPMQANVAVQQYLQDNNKKEASKII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH DTLIESRSADAYSYTYASSIALQDKQVDKAEQMAKEAISIDKDIPEAHYYLAVCYQLKGD HHHHHCCCCCCEEEHHHHHHEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCC TKAAIKEADMAKQLSSEPFFDSYYNELEKTKE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SFQEQYIFWRLTNYFLGVEKYRLIHLHEEKQELWLENNSQKKRPVIRIQMKELSWANVV CCCHHHHHHHHHHHHHCHHHEEEEEEECHHHHHHCCCCCCCCCCEEEEEEHHCHHHHHH ERDVNHTLHVTENLRKQMGRLKLPLINIYITPFEPMGDISPFFGEPITSPNEKVKLENIL HHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHE LANEQMNEHLDTLVKRLELPESEFILPNEITKDMVTKEREQVITYITSKVNEEQKVARNS ECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC KPIVTYSFIGLIIAAFLWIALQGGSTNTFNLIKWGGKFNPLIYAGEWWRFISPIFLHSGL CCEEHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHHHHH MHLASNAVMLYIVGAWAERIYGKWRYILILLLGGICGNIASFALNMNLSVGASTAVFAVM HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHH GALLYLVVLKPNLYAKTIGVSIASLVAVNLFIDLFSTQIDIAGHIGGLVGGFLLAGALSL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKQFFHWRRFAYGISLIAVTILFLYFGFQKGMQPYDPMQANVAVQQYLQDNNKKEASKII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH DTLIESRSADAYSYTYASSIALQDKQVDKAEQMAKEAISIDKDIPEAHYYLAVCYQLKGD HHHHHCCCCCCEEEHHHHHHEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCC TKAAIKEADMAKQLSSEPFFDSYYNELEKTKE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]