| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116872769
Identifier: 116872769
GI number: 116872769
Start: 1345052
End: 1345264
Strand: Direct
Name: 116872769
Synonym: lwe1353
Alternate gene names: NA
Gene position: 1345052-1345264 (Clockwise)
Preceding gene: 116872768
Following gene: 116872770
Centisome position: 47.8
GC content: 26.29
Gene sequence:
>213_bases ATGAAAACAGTATATGATGTTGCTCAGTTGTTAAGAAAGCATGGAATTATTGTTTATTTAGGAAAAAGACAATATGATAT CGAAATGATGGAATATGAAGTAACTGAACTTTTTAAACATAATATTTTAGACAGAGAAATATTTGCCACCGCTAGAAGCA TCTTAAAACAAGAATTAATAAAAGAACAACGTAAAAATAGTAGTTTAAACTAA
Upstream 100 bases:
>100_bases TATAAAAGAAGCAGATATGGCGAAACAATTATCAAGCGAACCATTTTTTGATTCTTATTATAATGAACTAGAAAAAACCA AGGAATAAGAGGTTTTTAAT
Downstream 100 bases:
>100_bases ATTGATTAGAAGGAGAACAGCAAAATGAACAAAAAATTAATTGGTGTAGATTTAGGCGGTACAACCGCAAAATTAGCTAT TTTAACAAAAGATGGAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEVTELFKHNILDREIFATARSILKQELIKEQRKNSSLN
Sequences:
>Translated_70_residues MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEVTELFKHNILDREIFATARSILKQELIKEQRKNSSLN >Mature_70_residues MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEVTELFKHNILDREIFATARSILKQELIKEQRKNSSLN
Specific function: Unknown
COG id: COG4483
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8401; Mature: 8401
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEVTELFKHNILDREIFATARSILKQELI CCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KEQRKNSSLN HHHHCCCCCC >Mature Secondary Structure MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEVTELFKHNILDREIFATARSILKQELI CCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KEQRKNSSLN HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA