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The map label for this gene is pduA [H]

Identifier: 116872525

GI number: 116872525

Start: 1124379

End: 1124666

Strand: Direct

Name: pduA [H]

Synonym: lwe1109

Alternate gene names: 116872525

Gene position: 1124379-1124666 (Clockwise)

Preceding gene: 116872523

Following gene: 116872526

Centisome position: 39.95

GC content: 46.53

Gene sequence:

>288_bases
ATGCAAGAAGCACTAGGTTTAGTTGAAACTAAAGGGCTAGTTGGCGCCATCGAAGCCGCTGACGCCATGGTTAAATCAGC
TAATGTAACATTAACAGGGTACGAAAAAATCGGGTCTGGTCTTGTTACTGTTATGGTTCGAGGCGATGTTGGTGCAGTTA
AAGCAGCAACAGAAGCAGGAGCCGCAGCAGCAAGAAATGTAGGTACCGTGATGAGTACGCATGTTATTCCTCGTCCGCAT
ACAGAGGTGGAAGAAATTTTACCAGTGAGGGTGAAGTCAGATGAGTGA

Upstream 100 bases:

>100_bases
TCGCGTCTTCTTTTTTTGATTTCGGAAGCGGCAACTATTTATATATTAGTTTGCATATACTGAGAGAGTAAAATACTTAT
TTTAAGAAGGAGGTACACCC

Downstream 100 bases:

>100_bases
ACAAAATAAACTGATTGACGAAATTCTAAAACAGGTAATGGAAACGGTGAGCGATGCCCCGGAAAAACTAGTAAAGGATG
GAGGATCACGTCAAATGAGT

Product: propanediol utilization protein PduA, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TEVEEILPVRVKSDE

Sequences:

>Translated_95_residues
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TEVEEILPVRVKSDE
>Mature_95_residues
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TEVEEILPVRVKSDE

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=92, Percent_Identity=61.9565217391304, Blast_Score=103, Evalue=3e-24,
Organism=Escherichia coli, GI87082105, Length=86, Percent_Identity=46.5116279069767, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9742; Mature: 9742

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHCCCEEEEEEECCCCCCHHHHHCC
AAAARNVGTVMSTHVIPRPHTEVEEILPVRVKSDE
HHHHHCCCHHHHHCCCCCCCCCHHHHCEEEEECCC
>Mature Secondary Structure
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHCCCEEEEEEECCCCCCHHHHHCC
AAAARNVGTVMSTHVIPRPHTEVEEILPVRVKSDE
HHHHHCCCHHHHHCCCCCCCCCHHHHCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]