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The map label for this gene is pduB [H]

Identifier: 116872526

GI number: 116872526

Start: 1124761

End: 1125462

Strand: Direct

Name: pduB [H]

Synonym: lwe1110

Alternate gene names: 116872526

Gene position: 1124761-1125462 (Clockwise)

Preceding gene: 116872525

Following gene: 116872527

Centisome position: 39.97

GC content: 41.45

Gene sequence:

>702_bases
ATGAGTGAAAAAGCAGTTCAATTAACAGAATTTGTAGGAACAGCGATTGGAGATACAATCGGCCTAGTGATTGCGAATGT
AGACGGTCAACTTTTAGAAGCAATGAAGCTTGAGAAGTCTTACCGTTCTATAGGTATTTTAGGAGCCCGTACTGGTGCAG
GCCCACATATTATGGCTGCGGATGAAGCAGTAAAAGCAACAAACACAGAAGTAATTAAAATTGAGTTACCGCGTGATACA
AAAGGCGGCGCAGGTCATGGCTCATTAATTATCTTTGGCGGCGACGATGTTTCTGACGTAAAACGTGCAGTGGAAGTTGC
ACTTAATGAATTAGATAAAAAATTTGGAGATGTATATGGTAATGAGGCAGGTCATATTGAACTTCAATATACTGCTCGTG
CAAGCCATGCTCTCGAAAAAGCGTTCGGCGCACCAGTTGGTAAAGCATTTGGAATTATCGTAGGTGGTCCGGCTGGAATT
GGTGTAGTAATGGCAGATACTGCTGTTAAATCAGCAAATGTAGATGTGGTTGCTTATTCTTCACCAGCAGATGGAACAAG
CTTCTCCAATGAAGTTATTCTTTGTATATCTGGAGATTCTGGCGCAGTTCGTCAAGCAGTTATTTCTGCACGTGAAATTG
GTAAAAAATTACTTGGAGCTTTAGGGGATGAACCGAAAAATGATCGTCCATCCTACATTTAG

Upstream 100 bases:

>100_bases
GAGTGAACAAAATAAACTGATTGACGAAATTCTAAAACAGGTAATGGAAACGGTGAGCGATGCCCCGGAAAAACTAGTAA
AGGATGGAGGATCACGTCAA

Downstream 100 bases:

>100_bases
AACGGAGGGTAACGACTGATGAAATCAAAACGCTTTGAAGAATTAGCAAAACGCCCGGTTAATCAAGATGGTTTTGTGAA
GGAATGGATTGAAGAAGGCT

Product: propanediol utilization protein PduB, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVIKIELPRDT
KGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKKFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGIIVGGPAGI
GVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI

Sequences:

>Translated_233_residues
MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVIKIELPRDT
KGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKKFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGIIVGGPAGI
GVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI
>Mature_232_residues
SEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVIKIELPRDTK
GGAGHGSLIIFGGDDVSDVKRAVEVALNELDKKFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGIIVGGPAGIG
VVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4816

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutL/PduB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009193
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 24023; Mature: 23891

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAA
CCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEC
DEAVKATNTEVIKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKKFGDVYG
CCHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
NEAGHIELQYTARASHALEKAFGAPVGKAFGIIVGGPAGIGVVMADTAVKSANVDVVAYS
CCCCEEEEEEECHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEC
SPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAA
CCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEC
DEAVKATNTEVIKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKKFGDVYG
CCHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
NEAGHIELQYTARASHALEKAFGAPVGKAFGIIVGGPAGIGVVMADTAVKSANVDVVAYS
CCCCEEEEEEECHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEC
SPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8071226; 9352910; 11677609 [H]