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The map label for this gene is yvrC [H]

Identifier: 116872469

GI number: 116872469

Start: 1068182

End: 1069075

Strand: Direct

Name: yvrC [H]

Synonym: lwe1051

Alternate gene names: 116872469

Gene position: 1068182-1069075 (Clockwise)

Preceding gene: 116872468

Following gene: 116872470

Centisome position: 37.96

GC content: 33.78

Gene sequence:

>894_bases
ATGAAATGGTTTAAAGGAATTGCTGTCGTTTTATTATTAGCTATCTTAACGGCTTGCGGAAATACTGAAGTAAAAGAAGT
AAATAAACAACCTGAAGAAATCAAAGTGAAAGATGCGACCGGTGAAACAATCACTTTGAAAAAAGAACCAACTAAAATAG
TCTCCTTAATACCAAGTAATACAGAAATCTTATTTTCATTAGGCCTTGGTGATGAAGTGAAGGGCGTATCTGCATATGAC
GATTATCCAAAAGAAGCTCAAAAAATAGAAAAAGTAACTTCTACTACAGTTGATACAGAGAAAATTATTGCACTTAAACC
TGATTTAGTTTTAGGTCATGAATCTATGCTTGCCACAGAAAAAGATGCTTATCAATTACTGAAAGATGCGGGAGTTAACG
TTTTTGTTGTACCAAACGCAACTAATTTAAAAGAAACAGAAAAATCTATTGCCACAATTGGGGAACTAACTGGCAAAGAA
AAAGAAGCATCAAAAGTGACCGATTCCATGGAAAAACAAAAGAAAGAAATCGAAAAGAAAGCAAAAGAATTAAAAACATC
TCCAAAAGTATGGATTGAAATTAGTCCAGATTTATATACAGCTGGTAAAGGGACTTTTATGGACGAAATGTTAGAACTTG
CTGGTGGTACTAATATCGTTACTGAATCAGGGTTTATTCCTTATAACGAAGAAAAAGTTGTCGAATTGAATCCGGATATT
ATCTTATCTGTCTATCCAGATGCTAAATCAACTATTTTAAAACGTACCGCATGGAAAGATATTCCAGCCGTAAAAAATGA
TCAAATTTATGAAATGGATGCAAATAAATTAAGTCGTCCAGGACCAAGATTACTTGAAGGCGCAGCGGATATTCAAGCGG
TTCTTGGAAACTAA

Upstream 100 bases:

>100_bases
TAAAAATCGAGAAGATAAACGTGAGAATATAGACGTTTTTCCCAGATTTATTAGTGTTATATTTCCCACCCGTTTTTTCT
GAAAAAAGGAGAATATACAT

Downstream 100 bases:

>100_bases
TTCTTTGATAATTACAGATGGAGCTTTACAAAAAACAACTTTTAAGGTAATTTAACATAGGGTGTATTTTTTTACTGAAT
AATATCAGTGGATTAATTCG

Product: ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKWFKGIAVVLLLAILTACGNTEVKEVNKQPEEIKVKDATGETITLKKEPTKIVSLIPSNTEILFSLGLGDEVKGVSAYD
DYPKEAQKIEKVTSTTVDTEKIIALKPDLVLGHESMLATEKDAYQLLKDAGVNVFVVPNATNLKETEKSIATIGELTGKE
KEASKVTDSMEKQKKEIEKKAKELKTSPKVWIEISPDLYTAGKGTFMDEMLELAGGTNIVTESGFIPYNEEKVVELNPDI
ILSVYPDAKSTILKRTAWKDIPAVKNDQIYEMDANKLSRPGPRLLEGAADIQAVLGN

Sequences:

>Translated_297_residues
MKWFKGIAVVLLLAILTACGNTEVKEVNKQPEEIKVKDATGETITLKKEPTKIVSLIPSNTEILFSLGLGDEVKGVSAYD
DYPKEAQKIEKVTSTTVDTEKIIALKPDLVLGHESMLATEKDAYQLLKDAGVNVFVVPNATNLKETEKSIATIGELTGKE
KEASKVTDSMEKQKKEIEKKAKELKTSPKVWIEISPDLYTAGKGTFMDEMLELAGGTNIVTESGFIPYNEEKVVELNPDI
ILSVYPDAKSTILKRTAWKDIPAVKNDQIYEMDANKLSRPGPRLLEGAADIQAVLGN
>Mature_297_residues
MKWFKGIAVVLLLAILTACGNTEVKEVNKQPEEIKVKDATGETITLKKEPTKIVSLIPSNTEILFSLGLGDEVKGVSAYD
DYPKEAQKIEKVTSTTVDTEKIIALKPDLVLGHESMLATEKDAYQLLKDAGVNVFVVPNATNLKETEKSIATIGELTGKE
KEASKVTDSMEKQKKEIEKKAKELKTSPKVWIEISPDLYTAGKGTFMDEMLELAGGTNIVTESGFIPYNEEKVVELNPDI
ILSVYPDAKSTILKRTAWKDIPAVKNDQIYEMDANKLSRPGPRLLEGAADIQAVLGN

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=203, Percent_Identity=30.5418719211823, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 32596; Mature: 32596

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWFKGIAVVLLLAILTACGNTEVKEVNKQPEEIKVKDATGETITLKKEPTKIVSLIPSN
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEEECCCC
TEILFSLGLGDEVKGVSAYDDYPKEAQKIEKVTSTTVDTEKIIALKPDLVLGHESMLATE
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEECCHHHHHCH
KDAYQLLKDAGVNVFVVPNATNLKETEKSIATIGELTGKEKEASKVTDSMEKQKKEIEKK
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AKELKTSPKVWIEISPDLYTAGKGTFMDEMLELAGGTNIVTESGFIPYNEEKVVELNPDI
HHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCE
ILSVYPDAKSTILKRTAWKDIPAVKNDQIYEMDANKLSRPGPRLLEGAADIQAVLGN
EEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWFKGIAVVLLLAILTACGNTEVKEVNKQPEEIKVKDATGETITLKKEPTKIVSLIPSN
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCEEEEECCCCEEEEECCCC
TEILFSLGLGDEVKGVSAYDDYPKEAQKIEKVTSTTVDTEKIIALKPDLVLGHESMLATE
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEECCHHHHHCH
KDAYQLLKDAGVNVFVVPNATNLKETEKSIATIGELTGKEKEASKVTDSMEKQKKEIEKK
HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AKELKTSPKVWIEISPDLYTAGKGTFMDEMLELAGGTNIVTESGFIPYNEEKVVELNPDI
HHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCE
ILSVYPDAKSTILKRTAWKDIPAVKNDQIYEMDANKLSRPGPRLLEGAADIQAVLGN
EEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]