| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is tagG [H]
Identifier: 116872470
GI number: 116872470
Start: 1069370
End: 1070161
Strand: Direct
Name: tagG [H]
Synonym: lwe1052
Alternate gene names: 116872470
Gene position: 1069370-1070161 (Clockwise)
Preceding gene: 116872469
Following gene: 116872471
Centisome position: 38.0
GC content: 30.93
Gene sequence:
>792_bases ATGGAAGTTATTAAAGAACAAGTTAAAAATTTACCAATGATATTTCGTATCGCTCGCTATGAAGATAAAGCTACGTATCA AAGCCATTATTTAGGATTAGCTTGGCAGATTTTAAATCCATTAATTCAAATTGCAATTTATTACTTTGTGTTTGGATTTG CGATGAAAGCCAAATCTGGATCAGATGCTAGTTATATTGAATGGATGCTTGCAGGGATTATTCCTTGGTTCTTCATTAGT GCGGTTATTTTACAAGGTGCGAATAGTATTTATAATAAAATAAGTATGGTTTCAAAAATGAATTTCCCAATGAGTATTCT ACCTAATATAACCATTGTTTCTAATTTAACAAGTTATTTTACGATGATGCTGATTTTATTAGGATTGTTTGCGATTAATG GAACACCTATTACCATTTATTGGGGACAATATTTGTATTACTTTGTTGCAATGATTGCCTTCTTATATAGTGTGACATTG TTTAATGCAACTATTAGTGTTTTGGTGAGAGATTATTATATTATGCTACAGTCAGTCATGCGAGTACTTTTCTATATGTC TGGTATTGTATGGAATTTAGAAACAATGTTGCCACAATGGTTGGTTGATTTATTAAAATTAAATCCAATATATTATGTTG TAAACGGCTTTAGAGAGACCTTTTTAATGCATAAAGGTTTTTGGGAATCGCCTTCTTATACAATGTACTTTTGGTTAATA ACAATTGTATTGCTTTTTGTTGGAGCGACACTACACATGAAATTCCGCGAACGTTTCGTGGATTATTTATAG
Upstream 100 bases:
>100_bases GGTTTTTAAGTGGAGGAGTTGCCTATAAGAATAAAGTGAGCAGAAACTGGTTGGAAAACCATATTATTTTTCGGGAAGAA GTGTTTTTGTGAAACAGGTT
Downstream 100 bases:
>100_bases GAGGTTAGACAGATGGATAAAAATATTAAAGTATCATTTAAACATGTGTCAAAAGAATATGACCTCTATCAAAATAAATC AGATAAGATTAAAGGCTTAT
Product: techoic acid ABC transporter, efflux permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MEVIKEQVKNLPMIFRIARYEDKATYQSHYLGLAWQILNPLIQIAIYYFVFGFAMKAKSGSDASYIEWMLAGIIPWFFIS AVILQGANSIYNKISMVSKMNFPMSILPNITIVSNLTSYFTMMLILLGLFAINGTPITIYWGQYLYYFVAMIAFLYSVTL FNATISVLVRDYYIMLQSVMRVLFYMSGIVWNLETMLPQWLVDLLKLNPIYYVVNGFRETFLMHKGFWESPSYTMYFWLI TIVLLFVGATLHMKFRERFVDYL
Sequences:
>Translated_263_residues MEVIKEQVKNLPMIFRIARYEDKATYQSHYLGLAWQILNPLIQIAIYYFVFGFAMKAKSGSDASYIEWMLAGIIPWFFIS AVILQGANSIYNKISMVSKMNFPMSILPNITIVSNLTSYFTMMLILLGLFAINGTPITIYWGQYLYYFVAMIAFLYSVTL FNATISVLVRDYYIMLQSVMRVLFYMSGIVWNLETMLPQWLVDLLKLNPIYYVVNGFRETFLMHKGFWESPSYTMYFWLI TIVLLFVGATLHMKFRERFVDYL >Mature_263_residues MEVIKEQVKNLPMIFRIARYEDKATYQSHYLGLAWQILNPLIQIAIYYFVFGFAMKAKSGSDASYIEWMLAGIIPWFFIS AVILQGANSIYNKISMVSKMNFPMSILPNITIVSNLTSYFTMMLILLGLFAINGTPITIYWGQYLYYFVAMIAFLYSVTL FNATISVLVRDYYIMLQSVMRVLFYMSGIVWNLETMLPQWLVDLLKLNPIYYVVNGFRETFLMHKGFWESPSYTMYFWLI TIVLLFVGATLHMKFRERFVDYL
Specific function: Part of the ABC transporter complex tagGH (TC 3.A.1.34.1) involved in exporting the two types of intracellularly synthesized teichoic acids. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1682
COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000412 - InterPro: IPR013525 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 30877; Mature: 30877
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVIKEQVKNLPMIFRIARYEDKATYQSHYLGLAWQILNPLIQIAIYYFVFGFAMKAKSG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDASYIEWMLAGIIPWFFISAVILQGANSIYNKISMVSKMNFPMSILPNITIVSNLTSYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH TMMLILLGLFAINGTPITIYWGQYLYYFVAMIAFLYSVTLFNATISVLVRDYYIMLQSVM HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLFYMSGIVWNLETMLPQWLVDLLKLNPIYYVVNGFRETFLMHKGFWESPSYTMYFWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TIVLLFVGATLHMKFRERFVDYL HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVIKEQVKNLPMIFRIARYEDKATYQSHYLGLAWQILNPLIQIAIYYFVFGFAMKAKSG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDASYIEWMLAGIIPWFFISAVILQGANSIYNKISMVSKMNFPMSILPNITIVSNLTSYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH TMMLILLGLFAINGTPITIYWGQYLYYFVAMIAFLYSVTLFNATISVLVRDYYIMLQSVM HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLFYMSGIVWNLETMLPQWLVDLLKLNPIYYVVNGFRETFLMHKGFWESPSYTMYFWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH TIVLLFVGATLHMKFRERFVDYL HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7565096; 9384377 [H]