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The map label for this gene is yddH [H]

Identifier: 116872201

GI number: 116872201

Start: 812354

End: 813382

Strand: Direct

Name: yddH [H]

Synonym: lwe0781

Alternate gene names: 116872201

Gene position: 812354-813382 (Clockwise)

Preceding gene: 116872200

Following gene: 116872204

Centisome position: 28.87

GC content: 38.39

Gene sequence:

>1029_bases
ATGAAGATCTCTAAGCGTTTGGCGTTTTTTCTCGTTAGCTTCTTTTTTATCTTTATTTTATTGATTGGAGGAACAAGTTC
ATCGACTAGTGTTACTGATACAGAAGAGGGACAAAATCTTCCAGAAGCGGTGCTTCGATGGAAAGAAAAAGTAACTAAAG
AAGCGGTTAAAAATGAAATATCAGAAGCCGTTCCCTATCTATTAGGAATTATTATGGTGGAGACGGGAGGGAATTCTGAA
AAGTATCCCGATATTATGCAGTGTAGTGAAAGCCAAGGGAGACAACCAAATTCCATAACAACCCCCGATGAATCAATAGA
AGTTGGGGTTAAATACTTTGCGGATATGTGGAAAGGGCATCGAGAGTATGAGATTTTAAACATTGTACAGGCGTACAATT
TCGGAGGTGACTTTTTGAGTCACTCTGGCAAAAGTTATTCATTAGAGAGTGCCATCCAGTTTTCCAAGAACCAAGCAAAT
GGACAGAAAGTTACCTACACAAATCCAGTGGCAGTTAGATTAGGTTATGATTATCGCTATGCATATGGCAACATGTTTTA
CAGCCAAATTGTGAAGCAATATATATCTTCTGATTCTAGTAATACCGGCACTGGTAGAAATTCTGAGATTGCTAAAATTG
CATCAGATGAACTAGCAGAAGGCATTCATGAAGGAGGAGAAAAATACTGGCGTTGGTATGGTTTTAATAGTCGTGTAGAA
TGGTGCGCCACTTTTGTTTCTTATGTGGCTGAAAAAGCAAATGTGAAAATGGACCGATTTGCCTATTGTCCAACAGGAAT
AAATAATTTTAAAGCGAATAATCAATGGCAGAATGGCGGAGTAGAGCCAAGGAGTGGAGCAATTATTTTCTTTGATTGGG
ATGGTGATGGCATTAGTGATCATGTGGGAATTGTAGAGAAATTTGAAAATAATACAGTTCACACGATTGAAGGGAACTCT
GGAGATAGGATTGCTAAACGGACTTATGAAAAGAGTAGTCCGTTTATACTAGGATATGGGATGCCTTAA

Upstream 100 bases:

>100_bases
GTACCTGTAGAACTAGTAGAAGCTAAGCAATTAGCAAAAGAAATGGGAGAGCTTAGAAAAGAAATCTACGAGGAAGTAGA
AATCAGTGAGGAGTCAGCCT

Downstream 100 bases:

>100_bases
ATCCAAGTAATTTACTAAATGAACAATATTCAGCTGTAAAAATCAAGCCGAATATTGTTTTGTGGAGTTCTTAAATGATT
AATTAGATTCAGTCCTTTAT

Product: putative secreted cell wall protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKISKRLAFFLVSFFFIFILLIGGTSSSTSVTDTEEGQNLPEAVLRWKEKVTKEAVKNEISEAVPYLLGIIMVETGGNSE
KYPDIMQCSESQGRQPNSITTPDESIEVGVKYFADMWKGHREYEILNIVQAYNFGGDFLSHSGKSYSLESAIQFSKNQAN
GQKVTYTNPVAVRLGYDYRYAYGNMFYSQIVKQYISSDSSNTGTGRNSEIAKIASDELAEGIHEGGEKYWRWYGFNSRVE
WCATFVSYVAEKANVKMDRFAYCPTGINNFKANNQWQNGGVEPRSGAIIFFDWDGDGISDHVGIVEKFENNTVHTIEGNS
GDRIAKRTYEKSSPFILGYGMP

Sequences:

>Translated_342_residues
MKISKRLAFFLVSFFFIFILLIGGTSSSTSVTDTEEGQNLPEAVLRWKEKVTKEAVKNEISEAVPYLLGIIMVETGGNSE
KYPDIMQCSESQGRQPNSITTPDESIEVGVKYFADMWKGHREYEILNIVQAYNFGGDFLSHSGKSYSLESAIQFSKNQAN
GQKVTYTNPVAVRLGYDYRYAYGNMFYSQIVKQYISSDSSNTGTGRNSEIAKIASDELAEGIHEGGEKYWRWYGFNSRVE
WCATFVSYVAEKANVKMDRFAYCPTGINNFKANNQWQNGGVEPRSGAIIFFDWDGDGISDHVGIVEKFENNTVHTIEGNS
GDRIAKRTYEKSSPFILGYGMP
>Mature_342_residues
MKISKRLAFFLVSFFFIFILLIGGTSSSTSVTDTEEGQNLPEAVLRWKEKVTKEAVKNEISEAVPYLLGIIMVETGGNSE
KYPDIMQCSESQGRQPNSITTPDESIEVGVKYFADMWKGHREYEILNIVQAYNFGGDFLSHSGKSYSLESAIQFSKNQAN
GQKVTYTNPVAVRLGYDYRYAYGNMFYSQIVKQYISSDSSNTGTGRNSEIAKIASDELAEGIHEGGEKYWRWYGFNSRVE
WCATFVSYVAEKANVKMDRFAYCPTGINNFKANNQWQNGGVEPRSGAIIFFDWDGDGISDHVGIVEKFENNTVHTIEGNS
GDRIAKRTYEKSSPFILGYGMP

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 38430; Mature: 38430

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKRLAFFLVSFFFIFILLIGGTSSSTSVTDTEEGQNLPEAVLRWKEKVTKEAVKNEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SEAVPYLLGIIMVETGGNSEKYPDIMQCSESQGRQPNSITTPDESIEVGVKYFADMWKGH
HHHHHHHHEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
REYEILNIVQAYNFGGDFLSHSGKSYSLESAIQFSKNQANGQKVTYTNPVAVRLGYDYRY
CHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCEEEEECCCEEE
AYGNMFYSQIVKQYISSDSSNTGTGRNSEIAKIASDELAEGIHEGGEKYWRWYGFNSRVE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHH
WCATFVSYVAEKANVKMDRFAYCPTGINNFKANNQWQNGGVEPRSGAIIFFDWDGDGISD
HHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCH
HVGIVEKFENNTVHTIEGNSGDRIAKRTYEKSSPFILGYGMP
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCC
>Mature Secondary Structure
MKISKRLAFFLVSFFFIFILLIGGTSSSTSVTDTEEGQNLPEAVLRWKEKVTKEAVKNEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SEAVPYLLGIIMVETGGNSEKYPDIMQCSESQGRQPNSITTPDESIEVGVKYFADMWKGH
HHHHHHHHEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
REYEILNIVQAYNFGGDFLSHSGKSYSLESAIQFSKNQANGQKVTYTNPVAVRLGYDYRY
CHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCEEEEECCCEEE
AYGNMFYSQIVKQYISSDSSNTGTGRNSEIAKIASDELAEGIHEGGEKYWRWYGFNSRVE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHH
WCATFVSYVAEKANVKMDRFAYCPTGINNFKANNQWQNGGVEPRSGAIIFFDWDGDGISD
HHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCH
HVGIVEKFENNTVHTIEGNSGDRIAKRTYEKSSPFILGYGMP
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]