Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is yddG [H]

Identifier: 116872200

GI number: 116872200

Start: 810589

End: 812367

Strand: Direct

Name: yddG [H]

Synonym: lwe0780

Alternate gene names: 116872200

Gene position: 810589-812367 (Clockwise)

Preceding gene: 116872199

Following gene: 116872201

Centisome position: 28.8

GC content: 35.81

Gene sequence:

>1779_bases
TTGTTAAAAGATGTCTTCGATATTGATTCTTTCCAGTCTTTCTTTGAAAAGGGTGGTTGGTTTAGTATCAATGAGAATTT
ACAAAGTGTTCTAAACGCCTTAATTAACCTTGCTTTTGGACTGATTAAGTACATGGTTCTTGCGCTTGATTATGTCATTG
AACAATTGTTTAATTTAAATCTTTTGGATGGGATATTGCCTGATTTATTTTCTACAGCTGGTTCTATCTATAACCAATTA
TTTAACGTATTGGGTATCTTACTTTTCACCTTTGTCATTGTCATTTCTGTCAAAGACTTCTTTGAAAAAGGTATTAGTAA
AGCTCTAATTCGATTTGGTATTTTTACATTGATTTATGCAGGCAGTATGGCATTCTTTTCAGACGGAGCAGCCAAAGTGC
AAGAGGTCAATACGATTTCTCAGAACGTTCAAGGGCAACTAGTCGATTTAACGAGCAGTAGCTTAAATAGTAGCAATCAA
TCTACAACGGAAAAGTTGATTGGTAGTGAGCAGCAGCTAGATGGCACGAGTAATATTCGTAATCTGATTTTTGATGAATT
TATTATTAAACCTTATGCACTACTTAATTTCGGAAAAACAGACATTACAAAAGAACAATTTGAGCTGTATTTAGTTAAGA
ACGGAGAAACCTTTGATAAAGAAAAGACGAAAGAAATTGAGAAAAAAATTAAGCAAGACTCTGAAAAAAATTCTTATCTG
ACTTCAGATCGCATGACGGAAAAAGTCGCTGTATTATTGAATACCTTTGTGATGTTATTTGTGATAGGAATTGCGGTGTT
ACTAATAGGTGTCGCCAATATTTTGATTCAACTATTGATTTACGGAATCATTTTTCTCTTTCCATCCCTGCTCTTTTTGG
CACTGATTCCCAATATGCATCATTTGATAAAAAATGGCTTTATGATGCTAGGGACATTGTTTGCCTCTAAGGTGGGAATA
GGGTTTTGTTTTGGCTTACTTTTTTCTATTATTAATCTTTTGGATTCTTTCTTTGTCGTCACCAATATTGTTACCATGTT
AGTGGGACTATTTGTCAAAGTGTTATTAGGGCTATTTATTTGGAAGAATAAAGGTCAGATTGTTCGTTCATTAACGAAAG
GGAAAACAGAACTGCGAGATTTTAAGTTCCCTAAAAGAGCTGCCAATAATCGGCAACAAGAGATAGAACAACGAGAAGAT
CAACAGAACCGATTGGCTGAGCAAACATATAAGACACAAACCGCAGAAAATGATTATCTTCGTTCAGGCGTAGAGTTGGA
TCGTGCTTACCGACAGAATGATTTCCAAGATAACTTATTGGTTCAAGCTGGAAATGAAGCCAATTCTCCTGAATCAACTT
CATTCGATGCAGGCGATACAGAATCAGTAAATCCTGAGGTTGAGTCAATCAAGAGTAAAGATTCAAATAGCTCTGACGAA
AAAGAAGAAAGATTATCTGATAGTGAGCCTGATATAGAACCAGTGGTGGGAACATCAACAGTGGATCAAGAAACGTCTTT
ACCATTGGAAGAAATGGATGATGGACTTATTTACCAACAACCTAGTTATGAGGAATTTGAGCAACGTCAGATAGACCAAA
TTGAAGAAAATGAGGCTAATCGAACTGAATCACCTCGTGTTACTCATGAATCGCAGGATCAACCAGTACCTGTAGAACTA
GTAGAAGCTAAGCAATTAGCAAAAGAAATGGGAGAGCTTAGAAAAGAAATCTACGAGGAAGTAGAAATCAGTGAGGAGTC
AGCCTATGAAGATCTCTAA

Upstream 100 bases:

>100_bases
TTGTCCTTATGAAGAATTGCATCAAATGTTGCAAACCGTGAAGAAAAATGCAAGTGCAGACGTGGAAACTGCCTTTAGTG
CATAGAAGGGAGTGAGCTTA

Downstream 100 bases:

>100_bases
GCGTTTGGCGTTTTTTCTCGTTAGCTTCTTTTTTATCTTTATTTTATTGATTGGAGGAACAAGTTCATCGACTAGTGTTA
CTGATACAGAAGAGGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MLKDVFDIDSFQSFFEKGGWFSINENLQSVLNALINLAFGLIKYMVLALDYVIEQLFNLNLLDGILPDLFSTAGSIYNQL
FNVLGILLFTFVIVISVKDFFEKGISKALIRFGIFTLIYAGSMAFFSDGAAKVQEVNTISQNVQGQLVDLTSSSLNSSNQ
STTEKLIGSEQQLDGTSNIRNLIFDEFIIKPYALLNFGKTDITKEQFELYLVKNGETFDKEKTKEIEKKIKQDSEKNSYL
TSDRMTEKVAVLLNTFVMLFVIGIAVLLIGVANILIQLLIYGIIFLFPSLLFLALIPNMHHLIKNGFMMLGTLFASKVGI
GFCFGLLFSIINLLDSFFVVTNIVTMLVGLFVKVLLGLFIWKNKGQIVRSLTKGKTELRDFKFPKRAANNRQQEIEQRED
QQNRLAEQTYKTQTAENDYLRSGVELDRAYRQNDFQDNLLVQAGNEANSPESTSFDAGDTESVNPEVESIKSKDSNSSDE
KEERLSDSEPDIEPVVGTSTVDQETSLPLEEMDDGLIYQQPSYEEFEQRQIDQIEENEANRTESPRVTHESQDQPVPVEL
VEAKQLAKEMGELRKEIYEEVEISEESAYEDL

Sequences:

>Translated_592_residues
MLKDVFDIDSFQSFFEKGGWFSINENLQSVLNALINLAFGLIKYMVLALDYVIEQLFNLNLLDGILPDLFSTAGSIYNQL
FNVLGILLFTFVIVISVKDFFEKGISKALIRFGIFTLIYAGSMAFFSDGAAKVQEVNTISQNVQGQLVDLTSSSLNSSNQ
STTEKLIGSEQQLDGTSNIRNLIFDEFIIKPYALLNFGKTDITKEQFELYLVKNGETFDKEKTKEIEKKIKQDSEKNSYL
TSDRMTEKVAVLLNTFVMLFVIGIAVLLIGVANILIQLLIYGIIFLFPSLLFLALIPNMHHLIKNGFMMLGTLFASKVGI
GFCFGLLFSIINLLDSFFVVTNIVTMLVGLFVKVLLGLFIWKNKGQIVRSLTKGKTELRDFKFPKRAANNRQQEIEQRED
QQNRLAEQTYKTQTAENDYLRSGVELDRAYRQNDFQDNLLVQAGNEANSPESTSFDAGDTESVNPEVESIKSKDSNSSDE
KEERLSDSEPDIEPVVGTSTVDQETSLPLEEMDDGLIYQQPSYEEFEQRQIDQIEENEANRTESPRVTHESQDQPVPVEL
VEAKQLAKEMGELRKEIYEEVEISEESAYEDL
>Mature_592_residues
MLKDVFDIDSFQSFFEKGGWFSINENLQSVLNALINLAFGLIKYMVLALDYVIEQLFNLNLLDGILPDLFSTAGSIYNQL
FNVLGILLFTFVIVISVKDFFEKGISKALIRFGIFTLIYAGSMAFFSDGAAKVQEVNTISQNVQGQLVDLTSSSLNSSNQ
STTEKLIGSEQQLDGTSNIRNLIFDEFIIKPYALLNFGKTDITKEQFELYLVKNGETFDKEKTKEIEKKIKQDSEKNSYL
TSDRMTEKVAVLLNTFVMLFVIGIAVLLIGVANILIQLLIYGIIFLFPSLLFLALIPNMHHLIKNGFMMLGTLFASKVGI
GFCFGLLFSIINLLDSFFVVTNIVTMLVGLFVKVLLGLFIWKNKGQIVRSLTKGKTELRDFKFPKRAANNRQQEIEQRED
QQNRLAEQTYKTQTAENDYLRSGVELDRAYRQNDFQDNLLVQAGNEANSPESTSFDAGDTESVNPEVESIKSKDSNSSDE
KEERLSDSEPDIEPVVGTSTVDQETSLPLEEMDDGLIYQQPSYEEFEQRQIDQIEENEANRTESPRVTHESQDQPVPVEL
VEAKQLAKEMGELRKEIYEEVEISEESAYEDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66998; Mature: 66998

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDVFDIDSFQSFFEKGGWFSINENLQSVLNALINLAFGLIKYMVLALDYVIEQLFNLN
CCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LLDGILPDLFSTAGSIYNQLFNVLGILLFTFVIVISVKDFFEKGISKALIRFGIFTLIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSMAFFSDGAAKVQEVNTISQNVQGQLVDLTSSSLNSSNQSTTEKLIGSEQQLDGTSNIR
CCHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCHHHHHHHCCCHHHCCCHHHHH
NLIFDEFIIKPYALLNFGKTDITKEQFELYLVKNGETFDKEKTKEIEKKIKQDSEKNSYL
HHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCH
TSDRMTEKVAVLLNTFVMLFVIGIAVLLIGVANILIQLLIYGIIFLFPSLLFLALIPNMH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLIKNGFMMLGTLFASKVGIGFCFGLLFSIINLLDSFFVVTNIVTMLVGLFVKVLLGLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKNKGQIVRSLTKGKTELRDFKFPKRAANNRQQEIEQREDQQNRLAEQTYKTQTAENDYL
HCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RSGVELDRAYRQNDFQDNLLVQAGNEANSPESTSFDAGDTESVNPEVESIKSKDSNSSDE
HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCH
KEERLSDSEPDIEPVVGTSTVDQETSLPLEEMDDGLIYQQPSYEEFEQRQIDQIEENEAN
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCC
RTESPRVTHESQDQPVPVELVEAKQLAKEMGELRKEIYEEVEISEESAYEDL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure
MLKDVFDIDSFQSFFEKGGWFSINENLQSVLNALINLAFGLIKYMVLALDYVIEQLFNLN
CCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LLDGILPDLFSTAGSIYNQLFNVLGILLFTFVIVISVKDFFEKGISKALIRFGIFTLIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSMAFFSDGAAKVQEVNTISQNVQGQLVDLTSSSLNSSNQSTTEKLIGSEQQLDGTSNIR
CCHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCHHHHHHHCCCHHHCCCHHHHH
NLIFDEFIIKPYALLNFGKTDITKEQFELYLVKNGETFDKEKTKEIEKKIKQDSEKNSYL
HHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCH
TSDRMTEKVAVLLNTFVMLFVIGIAVLLIGVANILIQLLIYGIIFLFPSLLFLALIPNMH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLIKNGFMMLGTLFASKVGIGFCFGLLFSIINLLDSFFVVTNIVTMLVGLFVKVLLGLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKNKGQIVRSLTKGKTELRDFKFPKRAANNRQQEIEQREDQQNRLAEQTYKTQTAENDYL
HCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RSGVELDRAYRQNDFQDNLLVQAGNEANSPESTSFDAGDTESVNPEVESIKSKDSNSSDE
HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCH
KEERLSDSEPDIEPVVGTSTVDQETSLPLEEMDDGLIYQQPSYEEFEQRQIDQIEENEAN
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCC
RTESPRVTHESQDQPVPVELVEAKQLAKEMGELRKEIYEEVEISEESAYEDL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]