| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872204
Identifier: 116872204
GI number: 116872204
Start: 815782
End: 816378
Strand: Direct
Name: 116872204
Synonym: lwe0784
Alternate gene names: NA
Gene position: 815782-816378 (Clockwise)
Preceding gene: 116872201
Following gene: 116872205
Centisome position: 28.99
GC content: 36.35
Gene sequence:
>597_bases ATGAAAAAGAAATGGTTTTCATATATTAGTGTAATGTTACTTGTAAGCCCTTCTTTAATTGGAACTGGACAAGTGTTTGC GGATACTATAGAACTTGAACAAACAGATGAATCAAAAAAAACAATGGCTGATGAAACAGAGCCATTGTTAGTACCACCAG CAATCGAACAACAAGAAGAAACTTCAGACAGTGAAACAAATACAAATGAAACAGAAAATAATGATTCAACGAAATCGTCA GAAGATAGTCTAGAAGAAATGAATAAGGAAGAAACTATCGCCACGGTAGAAGGGCATCAGACTAGAGAATCTTCAACAGA CACAAACGATGATATAGCTTCGGGTACCTTTGGGAGTGCACCTTGGAGAATTGACCAAAGTGGGACATTGCATATAGAAT CAGGAGTTTTCGACTATCATGGATCTACATATCCCTCTCCGTGGATAGGTTGGTCTAGCGATATTCAGAAAATTATTTTT GATGGGAAAGTTTCAACTAGCTTTGGAGCCTCGAGATTATTTGCTGATCTAACTCAAGTGAAAACAATTGAAAATTTATC AAATTTAGATACATCAAACGCTACTACCATGTCATAG
Upstream 100 bases:
>100_bases CATAGGCGGAACTAGTTATTTTTTTCGAAATAAAAAATACATTTGTTAAATTTACGATTTTTAAGCGTGAAACTATTAAT AAATTTAGGGAGAGAAAAAA
Downstream 100 bases:
>100_bases ATGTTTCAAGGTATGACATCTTTGACATCACTAGATCTTTCTGGATTTAATACATCAAAAGTAACAGATATGTCTGCAAT GTTTCAACACGCGCAGTCGT
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKKKWFSYISVMLLVSPSLIGTGQVFADTIELEQTDESKKTMADETEPLLVPPAIEQQEETSDSETNTNETENNDSTKSS EDSLEEMNKEETIATVEGHQTRESSTDTNDDIASGTFGSAPWRIDQSGTLHIESGVFDYHGSTYPSPWIGWSSDIQKIIF DGKVSTSFGASRLFADLTQVKTIENLSNLDTSNATTMS
Sequences:
>Translated_198_residues MKKKWFSYISVMLLVSPSLIGTGQVFADTIELEQTDESKKTMADETEPLLVPPAIEQQEETSDSETNTNETENNDSTKSS EDSLEEMNKEETIATVEGHQTRESSTDTNDDIASGTFGSAPWRIDQSGTLHIESGVFDYHGSTYPSPWIGWSSDIQKIIF DGKVSTSFGASRLFADLTQVKTIENLSNLDTSNATTMS >Mature_198_residues MKKKWFSYISVMLLVSPSLIGTGQVFADTIELEQTDESKKTMADETEPLLVPPAIEQQEETSDSETNTNETENNDSTKSS EDSLEEMNKEETIATVEGHQTRESSTDTNDDIASGTFGSAPWRIDQSGTLHIESGVFDYHGSTYPSPWIGWSSDIQKIIF DGKVSTSFGASRLFADLTQVKTIENLSNLDTSNATTMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21808; Mature: 21808
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKWFSYISVMLLVSPSLIGTGQVFADTIELEQTDESKKTMADETEPLLVPPAIEQQEE CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCHHH TSDSETNTNETENNDSTKSSEDSLEEMNKEETIATVEGHQTRESSTDTNDDIASGTFGSA CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCC PWRIDQSGTLHIESGVFDYHGSTYPSPWIGWSSDIQKIIFDGKVSTSFGASRLFADLTQV CEEECCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KTIENLSNLDTSNATTMS HHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKKWFSYISVMLLVSPSLIGTGQVFADTIELEQTDESKKTMADETEPLLVPPAIEQQEE CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCHHH TSDSETNTNETENNDSTKSSEDSLEEMNKEETIATVEGHQTRESSTDTNDDIASGTFGSA CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCC PWRIDQSGTLHIESGVFDYHGSTYPSPWIGWSSDIQKIIFDGKVSTSFGASRLFADLTQV CEEECCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KTIENLSNLDTSNATTMS HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA