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The map label for this gene is lcmR

Identifier: 116871710

GI number: 116871710

Start: 314825

End: 315031

Strand: Direct

Name: lcmR

Synonym: lwe0290

Alternate gene names: NA

Gene position: 314825-315031 (Clockwise)

Preceding gene: 116871709

Following gene: 116871711

Centisome position: 11.19

GC content: 28.99

Gene sequence:

>207_bases
ATGAAATATAGAAATATTCGTTCAATTAGAGAAGATAATGACATCACACAACAACAAATGGCTAAATTATTAAATGTGTC
TCAAAATACGTATTCTCAATATGAAACAGGGAAAATAGAATGGACTGCAACCGCCTTGATTAAGATTGCTGATTATTTTG
ATGTTAGTGTTGATTATTTACTTGATAGGAAGAAGAACAAAAACTAA

Upstream 100 bases:

>100_bases
TTAAATTGTTTTCCACTTGTTATTTCATTAAAATATCTTTATTACAGATGAAAAAGGTTATCTGCAATAAAGATATTTAT
AATTAATATAGGTGATAAAG

Downstream 100 bases:

>100_bases
GACGAGAAGAGTGAATATGAGATGGATAATTTTCTACAGTTTTCTTTGTTTTAAAAGTATTATTTAAAAATAGAAAGATA
GGAGGGGCTTCAATGATAGT

Product: transcriptional repressor, putative

Products: NA

Alternate protein names: Xin-Antitoxin System Antitoxin Component Xre Family; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Transcriptional Repressor

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKYRNIRSIREDNDITQQQMAKLLNVSQNTYSQYETGKIEWTATALIKIADYFDVSVDYLLDRKKNKN

Sequences:

>Translated_68_residues
MKYRNIRSIREDNDITQQQMAKLLNVSQNTYSQYETGKIEWTATALIKIADYFDVSVDYLLDRKKNKN
>Mature_68_residues
MKYRNIRSIREDNDITQQQMAKLLNVSQNTYSQYETGKIEWTATALIKIADYFDVSVDYLLDRKKNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8092; Mature: 8092

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRNIRSIREDNDITQQQMAKLLNVSQNTYSQYETGKIEWTATALIKIADYFDVSVDYL
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHH
LDRKKNKN
HCCCCCCC
>Mature Secondary Structure
MKYRNIRSIREDNDITQQQMAKLLNVSQNTYSQYETGKIEWTATALIKIADYFDVSVDYL
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHH
LDRKKNKN
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA