| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is blaR1 [H]
Identifier: 116871636
GI number: 116871636
Start: 223889
End: 224950
Strand: Direct
Name: blaR1 [H]
Synonym: lwe0216
Alternate gene names: 116871636
Gene position: 223889-224950 (Clockwise)
Preceding gene: 116871635
Following gene: 116871637
Centisome position: 7.96
GC content: 29.47
Gene sequence:
>1062_bases ATGAATGAACTGCTTAAGATGGTCTTATCCATGGCCCTCACTTCACTAGTGTTAATACCATGTATATGGATATTTGGAAA AGCATTTAATCGCTATTTAAGTAAGAAAAAAATCTATTATTTATGGCTTGTTGTTTTTCTCTTTTTAACAATACCTTTTT CATTTATTTTCTTTACGCCAACAAAAAATAATGAATTTATGTGGGGAAAAGGAACCGGTTTAGAAGGAGCTACTTCAGTT GTATTTGATAACAATGGTATTTTTGTAGAAAGAGATGCTAAAGTTGCTTTTTGGATGACATTACTCGATTATTTATGGGT AATTTGGTTGGTAATATTTTTACTTATTTTTATTTACAGAATCGCTTCTTATCGAAATTTTAAAAAATATGTTTTTTCAG GCGCACAAAAAGTAAATAATTTGGAGCAACTTGATCAATTAGGGGAGATTATAGATGAATTAAATATTAAAAAATCAGTT GAACTGATGATTAATCCACTAATTTCTTCACCTATTTTCTTAGGATTCAAGCGAAATGTTATAGTGTTACCTGATAAATC TTTTTCTGAAGAGGAACTTCAATATATTCTTAGACACGAGTTAATACATTGTAAACGAAAAGACATGTATTATGTCTGGA TTGCTCAATTTTTCGTTTGTATCTATTGGTTCAATCCTCTGGTGTATCTTATGAATAAACAAATCCAAATTGATCGTGAA TTAGCTTGTGACGAAGCGGTTTTAGCTACCCTGCCAAAAGAGAAATATTTGGGTTATGGAGATACATTACTCTCTTCGCT TGCAAAATCAGGAAACTATAAAGAATCATCCGTAGCCGTTTCACTTCACGAAAATACTAAAAAGTTAAAAGAAAGGCTTA CATTCATTGCAAATTATCAAAAGGAAGCAAAAAATAATAACACAATTTTACCTATTTTTCTGATAGCACTATGTAGTGTA GGTCTAATATTTAGTTTGTTTCAAACAGAAATATTCACTAAAGAAAAGAACAAATCCATTATAATTAAGAAAGATAAAAA TACAAATAACTTCTCTCGTTAA
Upstream 100 bases:
>100_bases GATGTAAAAGGATTAATCACGAATTTAGTACAGAATGACTTAATTTCTTCGGATGAACTTGATGATTTACAACAATTTTG GAAAAGGATGAAGTCACCTA
Downstream 100 bases:
>100_bases TTGAGGGAAGTTTTTTTGTGTAAGATATTGACTTTTAAGCCTACAAAATGTAGAATTAAAATGCATAAATAATACTAAAA AAGGTGGGGGAATTACATGT
Product: peptidase M56 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MNELLKMVLSMALTSLVLIPCIWIFGKAFNRYLSKKKIYYLWLVVFLFLTIPFSFIFFTPTKNNEFMWGKGTGLEGATSV VFDNNGIFVERDAKVAFWMTLLDYLWVIWLVIFLLIFIYRIASYRNFKKYVFSGAQKVNNLEQLDQLGEIIDELNIKKSV ELMINPLISSPIFLGFKRNVIVLPDKSFSEEELQYILRHELIHCKRKDMYYVWIAQFFVCIYWFNPLVYLMNKQIQIDRE LACDEAVLATLPKEKYLGYGDTLLSSLAKSGNYKESSVAVSLHENTKKLKERLTFIANYQKEAKNNNTILPIFLIALCSV GLIFSLFQTEIFTKEKNKSIIIKKDKNTNNFSR
Sequences:
>Translated_353_residues MNELLKMVLSMALTSLVLIPCIWIFGKAFNRYLSKKKIYYLWLVVFLFLTIPFSFIFFTPTKNNEFMWGKGTGLEGATSV VFDNNGIFVERDAKVAFWMTLLDYLWVIWLVIFLLIFIYRIASYRNFKKYVFSGAQKVNNLEQLDQLGEIIDELNIKKSV ELMINPLISSPIFLGFKRNVIVLPDKSFSEEELQYILRHELIHCKRKDMYYVWIAQFFVCIYWFNPLVYLMNKQIQIDRE LACDEAVLATLPKEKYLGYGDTLLSSLAKSGNYKESSVAVSLHENTKKLKERLTFIANYQKEAKNNNTILPIFLIALCSV GLIFSLFQTEIFTKEKNKSIIIKKDKNTNNFSR >Mature_353_residues MNELLKMVLSMALTSLVLIPCIWIFGKAFNRYLSKKKIYYLWLVVFLFLTIPFSFIFFTPTKNNEFMWGKGTGLEGATSV VFDNNGIFVERDAKVAFWMTLLDYLWVIWLVIFLLIFIYRIASYRNFKKYVFSGAQKVNNLEQLDQLGEIIDELNIKKSV ELMINPLISSPIFLGFKRNVIVLPDKSFSEEELQYILRHELIHCKRKDMYYVWIAQFFVCIYWFNPLVYLMNKQIQIDRE LACDEAVLATLPKEKYLGYGDTLLSSLAKSGNYKESSVAVSLHENTKKLKERLTFIANYQKEAKNNNTILPIFLIALCSV GLIFSLFQTEIFTKEKNKSIIIKKDKNTNNFSR
Specific function: BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis [H]
COG id: COG4219
COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M56 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001460 - InterPro: IPR008756 [H]
Pfam domain/function: PF05569 Peptidase_M56; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 41296; Mature: 41296
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELLKMVLSMALTSLVLIPCIWIFGKAFNRYLSKKKIYYLWLVVFLFLTIPFSFIFFTP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE TKNNEFMWGKGTGLEGATSVVFDNNGIFVERDAKVAFWMTLLDYLWVIWLVIFLLIFIYR CCCCCEEECCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IASYRNFKKYVFSGAQKVNNLEQLDQLGEIIDELNIKKSVELMINPLISSPIFLGFKRNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE IVLPDKSFSEEELQYILRHELIHCKRKDMYYVWIAQFFVCIYWFNPLVYLMNKQIQIDRE EEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LACDEAVLATLPKEKYLGYGDTLLSSLAKSGNYKESSVAVSLHENTKKLKERLTFIANYQ HHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH KEAKNNNTILPIFLIALCSVGLIFSLFQTEIFTKEKNKSIIIKKDKNTNNFSR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MNELLKMVLSMALTSLVLIPCIWIFGKAFNRYLSKKKIYYLWLVVFLFLTIPFSFIFFTP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE TKNNEFMWGKGTGLEGATSVVFDNNGIFVERDAKVAFWMTLLDYLWVIWLVIFLLIFIYR CCCCCEEECCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IASYRNFKKYVFSGAQKVNNLEQLDQLGEIIDELNIKKSVELMINPLISSPIFLGFKRNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE IVLPDKSFSEEELQYILRHELIHCKRKDMYYVWIAQFFVCIYWFNPLVYLMNKQIQIDRE EEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LACDEAVLATLPKEKYLGYGDTLLSSLAKSGNYKESSVAVSLHENTKKLKERLTFIANYQ HHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH KEAKNNNTILPIFLIALCSVGLIFSLFQTEIFTKEKNKSIIIKKDKNTNNFSR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3040663; 3260234; 2404938 [H]