| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871637
Identifier: 116871637
GI number: 116871637
Start: 225047
End: 225709
Strand: Direct
Name: 116871637
Synonym: lwe0217
Alternate gene names: NA
Gene position: 225047-225709 (Clockwise)
Preceding gene: 116871636
Following gene: 116871638
Centisome position: 8.0
GC content: 33.63
Gene sequence:
>663_bases ATGTTCGGTCGAAAACAAGCTGTTATACCAAGTGAGTACAATGATTTTAATACTTTTTCACCCGATAAAGAAAAATTGCT TTGCATAGGTGCACCTAGTACGGAATGTAAACATGGAATTACAACAAAATTAGATGGTTCGCACAAAATGCTGAAACTCT TTTATCCGAAAAAAAGTGAAGGTAAAACGATGAAATATTGGCTTCCAATGTTTGGGATTACTGACTCTCAGTCCGCTGTA GAAGTTATATCAAGTTGGATTAAAGCAAATGATTTTTACGAGGAAGTTACTCCGGATACAACTAGAGAGGTTATTAAAGA GTTAACTAAAGCAGCTAAAAAGTATGATTTTGATGGAAGTGACTTAATAGATGCTGCCAGCAAAGTAAAAACTTATGGCG CTTTTGATATTGACAGATTAGGTTATATTGTACGTGTTTGTTTTTCTTTAAACTTGCTCACAGAAGAACAAGCATGGAGT TTCTTGAAACAATTGCAGGAAGATACAGAGGCGCATTTTGATAATTGGGATGATTATATGGTCAGTTATTTAAATGGGCA AGAAGGATTAGATACAAGTTGGTATAGCAGTGCATGTGAATCCTATATCAAAATGAAAAAGGATTCAACGAGTTTAATGA ATAAATATCAACTAAAAGATTAA
Upstream 100 bases:
>100_bases TTAATTGAGGGAAGTTTTTTTGTGTAAGATATTGACTTTTAAGCCTACAAAATGTAGAATTAAAATGCATAAATAATACT AAAAAAGGTGGGGGAATTAC
Downstream 100 bases:
>100_bases CAAAAAGGGAGTTTACAAAAAACATGAAAAAATTATTAAGTTTAGTAGGGATTTTATTAATGGCACTCTTAGTAACGGCT TGTGGAAATGATCAAGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MFGRKQAVIPSEYNDFNTFSPDKEKLLCIGAPSTECKHGITTKLDGSHKMLKLFYPKKSEGKTMKYWLPMFGITDSQSAV EVISSWIKANDFYEEVTPDTTREVIKELTKAAKKYDFDGSDLIDAASKVKTYGAFDIDRLGYIVRVCFSLNLLTEEQAWS FLKQLQEDTEAHFDNWDDYMVSYLNGQEGLDTSWYSSACESYIKMKKDSTSLMNKYQLKD
Sequences:
>Translated_220_residues MFGRKQAVIPSEYNDFNTFSPDKEKLLCIGAPSTECKHGITTKLDGSHKMLKLFYPKKSEGKTMKYWLPMFGITDSQSAV EVISSWIKANDFYEEVTPDTTREVIKELTKAAKKYDFDGSDLIDAASKVKTYGAFDIDRLGYIVRVCFSLNLLTEEQAWS FLKQLQEDTEAHFDNWDDYMVSYLNGQEGLDTSWYSSACESYIKMKKDSTSLMNKYQLKD >Mature_220_residues MFGRKQAVIPSEYNDFNTFSPDKEKLLCIGAPSTECKHGITTKLDGSHKMLKLFYPKKSEGKTMKYWLPMFGITDSQSAV EVISSWIKANDFYEEVTPDTTREVIKELTKAAKKYDFDGSDLIDAASKVKTYGAFDIDRLGYIVRVCFSLNLLTEEQAWS FLKQLQEDTEAHFDNWDDYMVSYLNGQEGLDTSWYSSACESYIKMKKDSTSLMNKYQLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25284; Mature: 25284
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRKQAVIPSEYNDFNTFSPDKEKLLCIGAPSTECKHGITTKLDGSHKMLKLFYPKKSE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCCC GKTMKYWLPMFGITDSQSAVEVISSWIKANDFYEEVTPDTTREVIKELTKAAKKYDFDGS CCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH DLIDAASKVKTYGAFDIDRLGYIVRVCFSLNLLTEEQAWSFLKQLQEDTEAHFDNWDDYM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VSYLNGQEGLDTSWYSSACESYIKMKKDSTSLMNKYQLKD HHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MFGRKQAVIPSEYNDFNTFSPDKEKLLCIGAPSTECKHGITTKLDGSHKMLKLFYPKKSE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCCC GKTMKYWLPMFGITDSQSAVEVISSWIKANDFYEEVTPDTTREVIKELTKAAKKYDFDGS CCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH DLIDAASKVKTYGAFDIDRLGYIVRVCFSLNLLTEEQAWSFLKQLQEDTEAHFDNWDDYM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VSYLNGQEGLDTSWYSSACESYIKMKKDSTSLMNKYQLKD HHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA