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The map label for this gene is yabE [H]

Identifier: 116871575

GI number: 116871575

Start: 155833

End: 157071

Strand: Direct

Name: yabE [H]

Synonym: lwe0155

Alternate gene names: 116871575

Gene position: 155833-157071 (Clockwise)

Preceding gene: 116871574

Following gene: 116871576

Centisome position: 5.54

GC content: 35.11

Gene sequence:

>1239_bases
ATGACCATGGAAAACAGCAGTAACGTAGCCCAATCATCAAAATGGAAATTACCAATCATGATTGCAGGATTTGTTATTGT
AGTAGCATTGGTTTTTTATTTCGTTTTCGAAGGAACTAAAAACGATATCACTATAGTAAACGCTGGTGAAAAAACAGAAT
CAAGAACACATGCTAAAACAGTTTCTGAAGCATTAGATGAAGCAGGAATTAAAGTAAGTGCACACGATGAAGTTGCGCCA
GGGAAAAATGCAGAAATTAAAGACGGTATGGAAATCAAATATCTTCCAGCACGTCAAATTACAATAAATGATAATGGCAC
TGAAAAAAATGTTTGGAGTACAAAATCAAACGTAGCAGATTTGCTTAAAGACGAAAATATTACAACTCGTCCGCATGATG
TGCTAAGCGTGTCCTTAGATGATAAATTAAAAGATGGACTTGAAATCGATATTAATCGTGCCATCCAACTTTCCTTACAA
AACGGAGCAAAAAAAGATACAGTATGGACAACAAAAACTCAAGTTGGTGATTTACTAAGTGAGAAAAACATCAAACTTGA
TAAAGATGACCGAGTTTCACCTGCTAAAGACAGTAACTTAAAGGAAAAAATGACCGTACAAGTTACATATGTTGATTCAA
AAGCAGATAAGAAAAAAGAGCAAATCAAATTCAACACAGTTTACAAAGAAGACGACAGCCTTAATCAAGGAACTGAAAAA
GTCGTTCGCGAAGGTAAAACTGGTGAAAAAGTTATTGAATATAAAGTAACATTTGAAAATGGTAAAGAGAAAAAACGCGA
TATCATTAAAGAAAATATCACTTCTGCAAAAACAGATAAAGTAGTTGTTCGCGGTACGAAAGAAAAAGCTGTCGTATCTA
AAATCGCAAATGCAAAACCTGCTAAAAAAGTAACAACAACGAACACTTCTTCACACAAATCATCATCAAAAGCTCCATCT
AATGGAAAAACATTTACGATGGAATCTACTGCATATTCAGGTGGTGGAGTTACAGCTACTGGAATTAACTTAAGTGCTAA
TCCTGGTATGAAAGTAGTTGCTGTTGATCCAAGTATTATTCCACTTGGTTCTCGTGTTTGGGTTGAAGGTTACGGAGAAG
CAATCGCTGGAGATACAGGCGGCGCTATTAAAGGAAATATCGTTGACGTATATTTCTCCAATGAAAGTTCTTGCTATTCT
TGGGGTAGAAGAACAGTTACTGTAAAAGTGTTAAACTAA

Upstream 100 bases:

>100_bases
CAAGTTGAGATTGCGCAAATGTGAACAATCTGCCTGAAAAATTGACAGTTCTTTAGTCCCCTGTATATAATCACTAGCGA
AGTAGAAAGGGGAGAAATAC

Downstream 100 bases:

>100_bases
AATCGTATAAAAACGAGGCTGACTCATAGGGCCTCGTTTTTTCTTTGCCCAAAATGTGGTATGATGTATTTACTTATTTT
ATAAAAAAGGATGTAGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKTESRTHAKTVSEALDEAGIKVSAHDEVAP
GKNAEIKDGMEIKYLPARQITINDNGTEKNVWSTKSNVADLLKDENITTRPHDVLSVSLDDKLKDGLEIDINRAIQLSLQ
NGAKKDTVWTTKTQVGDLLSEKNIKLDKDDRVSPAKDSNLKEKMTVQVTYVDSKADKKKEQIKFNTVYKEDDSLNQGTEK
VVREGKTGEKVIEYKVTFENGKEKKRDIIKENITSAKTDKVVVRGTKEKAVVSKIANAKPAKKVTTTNTSSHKSSSKAPS
NGKTFTMESTAYSGGGVTATGINLSANPGMKVVAVDPSIIPLGSRVWVEGYGEAIAGDTGGAIKGNIVDVYFSNESSCYS
WGRRTVTVKVLN

Sequences:

>Translated_412_residues
MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKTESRTHAKTVSEALDEAGIKVSAHDEVAP
GKNAEIKDGMEIKYLPARQITINDNGTEKNVWSTKSNVADLLKDENITTRPHDVLSVSLDDKLKDGLEIDINRAIQLSLQ
NGAKKDTVWTTKTQVGDLLSEKNIKLDKDDRVSPAKDSNLKEKMTVQVTYVDSKADKKKEQIKFNTVYKEDDSLNQGTEK
VVREGKTGEKVIEYKVTFENGKEKKRDIIKENITSAKTDKVVVRGTKEKAVVSKIANAKPAKKVTTTNTSSHKSSSKAPS
NGKTFTMESTAYSGGGVTATGINLSANPGMKVVAVDPSIIPLGSRVWVEGYGEAIAGDTGGAIKGNIVDVYFSNESSCYS
WGRRTVTVKVLN
>Mature_411_residues
TMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKTESRTHAKTVSEALDEAGIKVSAHDEVAPG
KNAEIKDGMEIKYLPARQITINDNGTEKNVWSTKSNVADLLKDENITTRPHDVLSVSLDDKLKDGLEIDINRAIQLSLQN
GAKKDTVWTTKTQVGDLLSEKNIKLDKDDRVSPAKDSNLKEKMTVQVTYVDSKADKKKEQIKFNTVYKEDDSLNQGTEKV
VREGKTGEKVIEYKVTFENGKEKKRDIIKENITSAKTDKVVVRGTKEKAVVSKIANAKPAKKVTTTNTSSHKSSSKAPSN
GKTFTMESTAYSGGGVTATGINLSANPGMKVVAVDPSIIPLGSRVWVEGYGEAIAGDTGGAIKGNIVDVYFSNESSCYSW
GRRTVTVKVLN

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 44904; Mature: 44773

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKTESRTHAKT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH
VSEALDEAGIKVSAHDEVAPGKNAEIKDGMEIKYLPARQITINDNGTEKNVWSTKSNVAD
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHH
LLKDENITTRPHDVLSVSLDDKLKDGLEIDINRAIQLSLQNGAKKDTVWTTKTQVGDLLS
HHHCCCCCCCCCEEEEEEECHHHCCCCEEEECEEEEEEECCCCCCCCEEEEHHHHHHHHH
EKNIKLDKDDRVSPAKDSNLKEKMTVQVTYVDSKADKKKEQIKFNTVYKEDDSLNQGTEK
CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHEEEEEEECCCCCCCCCHHH
VVREGKTGEKVIEYKVTFENGKEKKRDIIKENITSAKTDKVVVRGTKEKAVVSKIANAKP
HHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC
AKKVTTTNTSSHKSSSKAPSNGKTFTMESTAYSGGGVTATGINLSANPGMKVVAVDPSII
CCEEEECCCCCCCCCCCCCCCCCEEEEECCEECCCCEEEEEEEEECCCCEEEEEECCCEE
PLGSRVWVEGYGEAIAGDTGGAIKGNIVDVYFSNESSCYSWGRRTVTVKVLN
ECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCHHHCCCEEEEEEEEC
>Mature Secondary Structure 
TMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKTESRTHAKT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH
VSEALDEAGIKVSAHDEVAPGKNAEIKDGMEIKYLPARQITINDNGTEKNVWSTKSNVAD
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHH
LLKDENITTRPHDVLSVSLDDKLKDGLEIDINRAIQLSLQNGAKKDTVWTTKTQVGDLLS
HHHCCCCCCCCCEEEEEEECHHHCCCCEEEECEEEEEEECCCCCCCCEEEEHHHHHHHHH
EKNIKLDKDDRVSPAKDSNLKEKMTVQVTYVDSKADKKKEQIKFNTVYKEDDSLNQGTEK
CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHEEEEEEECCCCCCCCCHHH
VVREGKTGEKVIEYKVTFENGKEKKRDIIKENITSAKTDKVVVRGTKEKAVVSKIANAKP
HHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC
AKKVTTTNTSSHKSSSKAPSNGKTFTMESTAYSGGGVTATGINLSANPGMKVVAVDPSII
CCEEEECCCCCCCCCCCCCCCCCEEEEECCEECCCCEEEEEEEEECCCCEEEEEECCCEE
PLGSRVWVEGYGEAIAGDTGGAIKGNIVDVYFSNESSCYSWGRRTVTVKVLN
ECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]