| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is flgG [H]
Identifier: 116691038
GI number: 116691038
Start: 3333902
End: 3334690
Strand: Reverse
Name: flgG [H]
Synonym: Bcen2424_3020
Alternate gene names: 116691038
Gene position: 3334690-3333902 (Counterclockwise)
Preceding gene: 116691039
Following gene: 116691037
Centisome position: 95.72
GC content: 65.78
Gene sequence:
>789_bases ATGAATCGTTCGCTCTACATCGCTGCCACCGGCATGAATGCGCAGCAGGCGCAGATGGACGTGATTTCGAACAACCTCGC GAACACCAGCACGAACGGCTTCAAGGCGTCGCGCGCGGTGTTCGAGGATCTGCTGTACCAGACCATCCGCCAGCCCGGCG CGAACTCGACGCAGCAGACCGAGCTGCCGTCGGGCCTGCAGCTCGGCACCGGCGTGCAGCAGGTCGCGACCGAGCGCCTG TACACGCAGGGCGGCCTCACGCAGACCGGCAACTCGAAGGACGTCGCGATCAACGGCGCGGGCTTCTTCCAGGTGCTGAT GCCGGACGGCACCAACGCGTACACCCGCGACGGCTCGTTCCAGACCAACGCGCAGGGCCAGCTCGTCACGTCGAGCGGCT ACCAGGTGCTGCCGGCGATCACGGTGCCGCAGAACGCGCAGTCGCTGACGATCGGCAAGGACGGCGTCGTGTCGGTCACG CAGCCGGGTTCGAGCAACGCGGTGCAGATCGGGTCGCTGCAGATCGCGACCTTCATCAACCCGACCGGCCTCGAGGCGAA GGGCGAGAACCTGTTCGCGGAAACGACGTCGTCGGGCGCGCCGAACGTGTCGCAGCCGGGGCTGAACGGCGCGGGCGTGC TCAACCAGGGCTACGTCGAGGCGTCGAACGTGAACGTCGTGCAGGAACTCGTCAACATGATCCAGACGCAGCGTGCCTAC GAGATCAACAGCAAGGCCGTGACGACGTCCGACCAGATGCTGCAGACCGTCACGCAGATGAAGAGCTAA
Upstream 100 bases:
>100_bases TCGAAGCTGATCCAGACGGCCGACCAGAACGAGCAGACGGCGAACCAGTTGCTCAATTTCAGCTGAGCGCCCGCGCCAGC CTACGCAGGAGAATCGACAA
Downstream 100 bases:
>100_bases CCGGAACGTCCCGTCGCAGCCATGAAGCAGGTTCGCCTCCCCTCGTCAGCCACCGTCCGCGCCGCCTGCGCGGTCGCGGT GGCGGCGCTCGCCGGTTGCG
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQTELPSGLQLGTGVQQVATERL YTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSFQTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVT QPGSSNAVQIGSLQIATFINPTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY EINSKAVTTSDQMLQTVTQMKS
Sequences:
>Translated_262_residues MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQTELPSGLQLGTGVQQVATERL YTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSFQTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVT QPGSSNAVQIGSLQIATFINPTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY EINSKAVTTSDQMLQTVTQMKS >Mature_262_residues MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQTELPSGLQLGTGVQQVATERL YTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSFQTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVT QPGSSNAVQIGSLQIATFINPTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY EINSKAVTTSDQMLQTVTQMKS
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=71.9230769230769, Blast_Score=380, Evalue=1e-107, Organism=Escherichia coli, GI1787317, Length=266, Percent_Identity=30.0751879699248, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787316, Length=138, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27535; Mature: 27535
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT CCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCE QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN EECCCCEEEECCCCEEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEECCEEEEEEEC PTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHE EINSKAVTTSDQMLQTVTQMKS ECCCCEEECHHHHHHHHHHHCC >Mature Secondary Structure MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT CCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCE QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN EECCCCEEEECCCCEEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEECCEEEEEEEC PTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHE EINSKAVTTSDQMLQTVTQMKS ECCCCEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]