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The map label for this gene is flgH [H]

Identifier: 116691037

GI number: 116691037

Start: 3333191

End: 3333880

Strand: Reverse

Name: flgH [H]

Synonym: Bcen2424_3019

Alternate gene names: 116691037

Gene position: 3333880-3333191 (Counterclockwise)

Preceding gene: 116691038

Following gene: 116691036

Centisome position: 95.69

GC content: 65.8

Gene sequence:

>690_bases
ATGAAGCAGGTTCGCCTCCCCTCGTCAGCCACCGTCCGCGCCGCCTGCGCGGTCGCGGTGGCGGCGCTCGCCGGTTGCGC
GCAGATTCCGCGCGATCCGATCATCCAGCAGCCGATGACGGCGCAGCCGCCGATGCCGATGTCGATGCAGGCGCCCGGCT
CGATCTACAACCCCGGCTATGCGGGGCGGCCGCTGTTCGAGGATCAGCGCCCGCGCAACATCGGCGACATCCTGACGATC
ATGATCGCGGAGAACATCAACGCGACCAAGTCGTCGGGCGCGAACACGAACCGGCAGGGCAACACCGACTTCAATGTGCC
GACCGCCGGCTTCCTCGGCGGGCTGTTCGCGAAGGCGAACCTGTCGGCGACCGGCGCGAACAAGTTCGCGGCCACCGGCG
GCGCGAGCGCGGCGAACACGTTCAACGGCACGATCACGGTGACCGTCACCAACGTGCTGCCGAACGGCAACCTCGTGGTC
AGCGGCGAGAAGCAGATGCTGATCAACCAGGGCAACGAATTCGTGCGTTTCTCGGGGGTCGTCAACCCGAACACGATCTC
GGGTGCGAACTCGGTCTACTCGACGCAGGTCGCCGACGCGAAGATCGAATACTCGTCGAAGGGCTACATCAACGAAGCCG
AGACGATGGGCTGGCTGCAGCGCTTCTTCCTCAACATCGCGCCGTGGTGA

Upstream 100 bases:

>100_bases
GCGTGCCTACGAGATCAACAGCAAGGCCGTGACGACGTCCGACCAGATGCTGCAGACCGTCACGCAGATGAAGAGCTAAC
CGGAACGTCCCGTCGCAGCC

Downstream 100 bases:

>100_bases
TGACGATGCAGCTGCCTCTTTTCCATCGCCTGTCGTTTCGTGCACTCACCGTCGCGCGGTTTGCCGCCTTCGTGCTGGCC
GCGTGCATGCTCGGCGCCGC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKQVRLPSSATVRAACAVAVAALAGCAQIPRDPIIQQPMTAQPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTI
MIAENINATKSSGANTNRQGNTDFNVPTAGFLGGLFAKANLSATGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVV
SGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYSSKGYINEAETMGWLQRFFLNIAPW

Sequences:

>Translated_229_residues
MKQVRLPSSATVRAACAVAVAALAGCAQIPRDPIIQQPMTAQPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTI
MIAENINATKSSGANTNRQGNTDFNVPTAGFLGGLFAKANLSATGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVV
SGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYSSKGYINEAETMGWLQRFFLNIAPW
>Mature_229_residues
MKQVRLPSSATVRAACAVAVAALAGCAQIPRDPIIQQPMTAQPPMPMSMQAPGSIYNPGYAGRPLFEDQRPRNIGDILTI
MIAENINATKSSGANTNRQGNTDFNVPTAGFLGGLFAKANLSATGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVV
SGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADAKIEYSSKGYINEAETMGWLQRFFLNIAPW

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=231, Percent_Identity=56.2770562770563, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24119; Mature: 24119

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVRLPSSATVRAACAVAVAALAGCAQIPRDPIIQQPMTAQPPMPMSMQAPGSIYNPGY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGRPLFEDQRPRNIGDILTIMIAENINATKSSGANTNRQGNTDFNVPTAGFLGGLFAKAN
CCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
LSATGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGV
CCCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEECCCCCEEEEECC
VNPNTISGANSVYSTQVADAKIEYSSKGYINEAETMGWLQRFFLNIAPW
CCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQVRLPSSATVRAACAVAVAALAGCAQIPRDPIIQQPMTAQPPMPMSMQAPGSIYNPGY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGRPLFEDQRPRNIGDILTIMIAENINATKSSGANTNRQGNTDFNVPTAGFLGGLFAKAN
CCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
LSATGANKFAATGGASAANTFNGTITVTVTNVLPNGNLVVSGEKQMLINQGNEFVRFSGV
CCCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEECCCCCEEEEECC
VNPNTISGANSVYSTQVADAKIEYSSKGYINEAETMGWLQRFFLNIAPW
CCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA