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The map label for this gene is flgF [H]

Identifier: 116691039

GI number: 116691039

Start: 3334725

End: 3335483

Strand: Reverse

Name: flgF [H]

Synonym: Bcen2424_3021

Alternate gene names: 116691039

Gene position: 3335483-3334725 (Counterclockwise)

Preceding gene: 116691040

Following gene: 116691038

Centisome position: 95.74

GC content: 67.46

Gene sequence:

>759_bases
ATGGACCGACTGATCTATACGGCGATGACGGGCGCGTCGCAGTCGCTCGACCAGCAGGCGATCGTCGCGAACAACCTCGC
GAATGCATCGACGACCGGCTTTCGCGCGCAGCTCGCGACGTATCGCGCGGTGCCGATGAATTTCGGCGACGGCAGCAACA
TCGACCCGACGACGACGCGCACCTACGTGCTCGCGTCGACGCCCGGCGCCGATTACGCGCCGGGTCCGATCACGCGCACC
GGCAATCCGCTGGACGTCGCCGTGCAGGGCCCGGGCTGGCTGTCGGTGCAGACGGCCGACGGCAGCGAGGCGTACACGCG
CGCCGGCAACCTGCACGTCGACGAGAACGGCCAGCTCGTCAACGCGAGCAACCTGCCGGTGATCGGCAACGGCGGCCCGA
TCTCGGTGCCGCCCAACGCGGAAGTGACGATCGGCAAGGACGGCACGGTGTCCGCGCTGATGCCGGGCGACCCGCCGACC
GCGGTCGCGATCGTCGACCAGATGAAGCTCGTCAATCCCGATGCGGCCACGCTCACGCGCGGCAACGACGGGTTGTTCCG
CACCGCCGACGGCAATCCGGCCGACGTCGACCCGAACGTGGTCGTCACGCCGAATTCGCTCGAAGGCAGCAACGTGAACC
CGGTGACCGCGATGGTCGCGATGATCGACAACGCACGGGCATTCCAGCTGCAGTCGAAGCTGATCCAGACGGCCGACCAG
AACGAGCAGACGGCGAACCAGTTGCTCAATTTCAGCTGA

Upstream 100 bases:

>100_bases
ACCGCGCAGCGCAACTACCAGGCGAACGCGCAGACGATCAAGACGCAGCAGACCGTCGACCAGACGCTCATCAACCTGTA
AGCGCGGATAACCGGCAGCC

Downstream 100 bases:

>100_bases
GCGCCCGCGCCAGCCTACGCAGGAGAATCGACAAATGAATCGTTCGCTCTACATCGCTGCCACCGGCATGAATGCGCAGC
AGGCGCAGATGGACGTGATT

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSNIDPTTTRTYVLASTPGADYAPGPITRT
GNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLVNASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPT
AVAIVDQMKLVNPDAATLTRGNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ
NEQTANQLLNFS

Sequences:

>Translated_252_residues
MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSNIDPTTTRTYVLASTPGADYAPGPITRT
GNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLVNASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPT
AVAIVDQMKLVNPDAATLTRGNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ
NEQTANQLLNFS
>Mature_252_residues
MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSNIDPTTTRTYVLASTPGADYAPGPITRT
GNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLVNASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPT
AVAIVDQMKLVNPDAATLTRGNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ
NEQTANQLLNFS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=258, Percent_Identity=53.4883720930233, Blast_Score=240, Evalue=5e-65,
Organism=Escherichia coli, GI1787318, Length=269, Percent_Identity=31.2267657992565, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26149; Mature: 26149

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSNIDPTTTR
CCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCE
TYVLASTPGADYAPGPITRTGNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLV
EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHCCCCEEECCCCCEE
NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDAATLTR
ECCCCCEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEEHHEECCCCHHEEEC
GNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ
CCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHEEEHHHCCCHHHHHHHHHHHHCCC
NEQTANQLLNFS
CHHHHHHHCCCC
>Mature Secondary Structure
MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSNIDPTTTR
CCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCE
TYVLASTPGADYAPGPITRTGNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLV
EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHCCCCEEECCCCCEE
NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDAATLTR
ECCCCCEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEEHHEECCCCHHEEEC
GNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ
CCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHEEEHHHCCCHHHHHHHHHHHHCCC
NEQTANQLLNFS
CHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]