| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690725
Identifier: 116690725
GI number: 116690725
Start: 2995989
End: 2996876
Strand: Direct
Name: 116690725
Synonym: Bcen2424_2705
Alternate gene names: NA
Gene position: 2995989-2996876 (Clockwise)
Preceding gene: 116690724
Following gene: 116690727
Centisome position: 86.0
GC content: 68.81
Gene sequence:
>888_bases ATGAAACAGCGTCCGCGGCCACGGCCTGCCGTCGTGGCCCTCGATCATCGCCAGATGGATCTGCCACTCTTCGACGGGCC GGCCGCTGCGCCGTCGGCGCCTGCCGCCCCGCCGGCACCGCCCGAAGCCGCCCCCGCCGCGCCGCTCGATCCGGGCCGGG CGCCCGATCGCTCGCGCGTGCGCACGTTCGCGCTCGACAGTCGCGTGCTCGAATACCGGCTGAGGCGCTCCGCGCGCCGC ACGATCGGCTTCACGATCGACGGCAGCGGGTTGTCGATCACCGCGCCGCGCTGGGTCACGCTCGCCGATATCGAAGCGGC GATCGCCGAGAAACAACGCTGGATCTTCGCGAAGCTCGCGGAGTGGAAGACGCGCACCGAGCAGCGCGCGCTGCCGCAAA TCGACTGGCGCGACGGCGCGCAGCTGCCGTATCTCGGCAAGACGGTGACGATCGCGCTCGGCGCGGGCGCCGTCGCGTTC GACGCCGATGCGCTGCGGCTGTCGCTGCCGCTGCCCGTGCAGGCCGACATGCAGCAGATCAAGGATCGCGTGCAAGGCTG GCTGCAGGGCGAAGCGAAACGCATCTTCGGCGAACGCCTCGTGGTCTACGCGGAAAAGCTCGGCGTCACGTATTCGATGT ATGCGCTGTCGTCGGCCGCGACGCGCTGGGGCAGTTGCTCGAGCGACGGCAAGATCCGCCTGAACTGGCGGCTGATTCAT TTCCCGATGTCGATCATCGACTACGTCGTCGCGCACGAGCTGTCGCACCTGCGCGAGATGAACCACAGCCCGGCCTTCTG GCAGACCGTCGAATCGATCTTCCCCGAGTTCCGCGAAGCACGGCACACGCTCAAGCATCACCCGCCCGAGCTGCTGCCGT CGCTTTGA
Upstream 100 bases:
>100_bases CGAGGCGTATCGTCAGGCGGGCAACGCCGGCACCCGCGATGCCGCGCGCGCCTGACGCCCCGGATTGCAGCCGTTGCGTA CGACAAAAAGAAGCGAACTG
Downstream 100 bases:
>100_bases CGCGCACGGCTTCGGCGCCAACGAAAAGGGCGATGCGGATTATCCCGCATCGCCCTTTTTCGCTGCCGCGGCGCATGCCG CGGCCCGGTTCGTCCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Peptidase; Hydrolase; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKQRPRPRPAVVALDHRQMDLPLFDGPAAAPSAPAAPPAPPEAAPAAPLDPGRAPDRSRVRTFALDSRVLEYRLRRSARR TIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTVTIALGAGAVAF DADALRLSLPLPVQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIH FPMSIIDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPSL
Sequences:
>Translated_295_residues MKQRPRPRPAVVALDHRQMDLPLFDGPAAAPSAPAAPPAPPEAAPAAPLDPGRAPDRSRVRTFALDSRVLEYRLRRSARR TIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTVTIALGAGAVAF DADALRLSLPLPVQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIH FPMSIIDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPSL >Mature_295_residues MKQRPRPRPAVVALDHRQMDLPLFDGPAAAPSAPAAPPAPPEAAPAAPLDPGRAPDRSRVRTFALDSRVLEYRLRRSARR TIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTVTIALGAGAVAF DADALRLSLPLPVQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIH FPMSIIDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPSL
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32986; Mature: 32986
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRPRPRPAVVALDHRQMDLPLFDGPAAAPSAPAAPPAPPEAAPAAPLDPGRAPDRSRV CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH RTFALDSRVLEYRLRRSARRTIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLA HHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHH EWKTRTEQRALPQIDWRDGAQLPYLGKTVTIALGAGAVAFDADALRLSLPLPVQADMQQI HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCEEEECCCCCHHHHHHH KDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE FPMSIIDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPSL CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC >Mature Secondary Structure MKQRPRPRPAVVALDHRQMDLPLFDGPAAAPSAPAAPPAPPEAAPAAPLDPGRAPDRSRV CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH RTFALDSRVLEYRLRRSARRTIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLA HHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHH EWKTRTEQRALPQIDWRDGAQLPYLGKTVTIALGAGAVAFDADALRLSLPLPVQADMQQI HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCEEEECCCCCHHHHHHH KDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKIRLNWRLIH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE FPMSIIDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPSL CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA