| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is plsC [H]
Identifier: 116690724
GI number: 116690724
Start: 2995179
End: 2995943
Strand: Direct
Name: plsC [H]
Synonym: Bcen2424_2704
Alternate gene names: 116690724
Gene position: 2995179-2995943 (Clockwise)
Preceding gene: 116690723
Following gene: 116690725
Centisome position: 85.97
GC content: 65.62
Gene sequence:
>765_bases ATGCGCTTCGTCCGCTCCCTGCTGCTGCTGATCTACTTCATCCTGTACACGGTGCCGTACGCCACCGCGTGTTTCATCGC GTTCCCGTTCATGCGCCCCGACGCGCGCTACTGGATGGCGGCCGGCTGGTGCAAGTCGACGCTGTGGGTCGTGCGCTGGC TGAACGGCATCCGCTACCGGATCGAAGGGTTCGAGAACCTGCCCGACGGCCCGGCCGTGCTGCTGTCGAAGCACCAGTCC GCGTGGGAGACGCTCGCGTTTCCGGCGCTGATGCCCAAGCCGCTGTGCTATGTGTTCAAGCGCGAGCTGCTGTACGTGCC GTTCTTCGGCTGGGCGCTCGGGCTGCTGCACATGGTCAACATCAATCGCAAGGAAGGCAAGAACGCGTTCGCGTCGGTGA TCCGCCAGGGCAAGAAGCGCCTGTCGGAAGGCGCATGGATGATCATGTTCCCCGAAGGCACGCGCACGCCGGTCGGCAAG CAGGGCAAATACAAGACGGGCGGCGCGCGCTTCGCGATCGAAACCGGCACGCCGGTCGTGCCGATCGCGCACAATGCAGG TCGTGTGTGGCCGCGCAACTCGTTCACGAAATTCCCGGGCGTCGTCACGGTGTCGATCGGCAAGCCGATCGCGAGCGAAG GGCTGACGCCCGACGCATTGAACTCGCAGGTCGAAGCGTGGATCGAAGCGGAAATGCGCCGCATCGATCCCGAGGCGTAT CGTCAGGCGGGCAACGCCGGCACCCGCGATGCCGCGCGCGCCTGA
Upstream 100 bases:
>100_bases GTCCACGACGATCTGCGCGCGTTTGCGCTCGATTTTCTTTCACACGAACACGAGTGATGCGGCTGCCGCGCGCATCCTCC CCAACGCCAGACTCACGCCG
Downstream 100 bases:
>100_bases CGCCCCGGATTGCAGCCGTTGCGTACGACAAAAAGAAGCGAACTGATGAAACAGCGTCCGCGGCCACGGCCTGCCGTCGT GGCCCTCGATCATCGCCAGA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIRYRIEGFENLPDGPAVLLSKHQS AWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVNINRKEGKNAFASVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETGTPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIASEGLTPDALNSQVEAWIEAEMRRIDPEAY RQAGNAGTRDAARA
Sequences:
>Translated_254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIRYRIEGFENLPDGPAVLLSKHQS AWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVNINRKEGKNAFASVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETGTPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIASEGLTPDALNSQVEAWIEAEMRRIDPEAY RQAGNAGTRDAARA >Mature_254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIRYRIEGFENLPDGPAVLLSKHQS AWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVNINRKEGKNAFASVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETGTPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIASEGLTPDALNSQVEAWIEAEMRRIDPEAY RQAGNAGTRDAARA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=194, Percent_Identity=28.8659793814433, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI15100175, Length=194, Percent_Identity=28.8659793814433, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI6041665, Length=174, Percent_Identity=28.1609195402299, Blast_Score=75, Evalue=4e-14, Organism=Escherichia coli, GI1789395, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17564032, Length=271, Percent_Identity=26.1992619926199, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320151, Length=206, Percent_Identity=26.2135922330097, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI281364648, Length=223, Percent_Identity=26.457399103139, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582856, Length=223, Percent_Identity=26.457399103139, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582854, Length=223, Percent_Identity=26.457399103139, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24641614, Length=221, Percent_Identity=26.2443438914027, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24641612, Length=221, Percent_Identity=26.2443438914027, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28620; Mature: 28620
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIRYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE IEGFENLPDGPAVLLSKHQSAWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVN ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC INRKEGKNAFASVIRQGKKRLSEGAWMIMFPEGTRTPVGKQGKYKTGGARFAIETGTPVV CCHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEE PIAHNAGRVWPRNSFTKFPGVVTVSIGKPIASEGLTPDALNSQVEAWIEAEMRRIDPEAY EEECCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH RQAGNAGTRDAARA HHCCCCCCCHHCCC >Mature Secondary Structure MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIRYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE IEGFENLPDGPAVLLSKHQSAWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVN ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC INRKEGKNAFASVIRQGKKRLSEGAWMIMFPEGTRTPVGKQGKYKTGGARFAIETGTPVV CCHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEE PIAHNAGRVWPRNSFTKFPGVVTVSIGKPIASEGLTPDALNSQVEAWIEAEMRRIDPEAY EEECCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH RQAGNAGTRDAARA HHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]