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The map label for this gene is xylB [H]

Identifier: 116690625

GI number: 116690625

Start: 2883070

End: 2884521

Strand: Reverse

Name: xylB [H]

Synonym: Bcen2424_2605

Alternate gene names: 116690625

Gene position: 2884521-2883070 (Counterclockwise)

Preceding gene: 116690627

Following gene: 116690624

Centisome position: 82.8

GC content: 75.34

Gene sequence:

>1452_bases
ATGCGCCTGCTCGGAATCGACCTCGGCACCGGCTCCGTCAAACTCGTCACGCTCGATGCCGACGGCGTCGAGCGCGCGGT
CGCGAGCGAACCTTATGCGTTGTCGTCGCCGCGGCCGGGCTGGGCGGAAATCGCCCCCGACGCGTGGTGGCAGGCGCTGG
TGCGCGCAGCCGCGCGACTGCCGGCCGACGAGCGCGCGCAGGTCGCGGCGATCGGTTTTTCGGGCCAGATGCATGGCGTC
GTGCTGATCGACGCGGCGGGCCAGCCGGTGCGGCCCGCGCTGCTGTGGCCGGACACGCGCGCGGTGCGCGAGGCGGACGC
GGCTGACTGGGCCGCCGCCGGATCGCCCGTCCCACCGAATCCCGTCGCGCCCGGCATGGCGGGCCCGCTGTTGCGCTGGC
TGGCCACGCACGAACCCGACGCGCTGCGCGTCGCGCGCTGGGCCGTGCAGCCGAAGGACTGGCTGCGCATCGCACTGGGC
GGCGACGTCGCGGCCGACCCGAGCGACGCGTGCGCAACCGCGCTCGCGACGCCCGACGGCGCGTGGGACAACGCATTGAT
CGACACGCTCGGCCTGCCTGCCGACCGCTTCGCGCCGGTGCGTGCGTCCACCGCGCGCTGCGGCGTGCTCGGCGCGCAGG
CCGCGGCCGCGCTCGGCCTGCCGGCCGGCGTGCCGCTCGCGACGGGCGCGGCCGATACCGCGTGCGCGGCGCTCGGCAGC
GGGCTGGCCGCGGCAGGCGACGCGCTGCTGACGACCGGCAGCGGCGGGCAGATCGTCGTGCTCGCGGATACGTTGCCGCC
CGCGCGGCGCGGCTTGCATCGCTATCGTGCGGCAGCCGGCGGCGGCTATTACACGATGGCGGCGATGCAGAACGTCGGGC
TCGCGCTCGAAGCCGTGCGCGGCTGGCTCGGCTACGCGCGATGGGCCGATGCGTATGACGAAGCGTTCGCCCAGCCGGCG
TCCGAACGGCTGTGCTTCCTGCCGTACCTGACCGGCGAGCGTTCGCCGTGGATGAACCCCGATGCGCGCGGCGGCTGGCT
CGGCCTCGGGCTCGCCGACACGCGCGGCGCGATGATGCGCGCCGCATTCGAAGGCGTCGCGTTCGCGTTGCGCGCGGGGC
TCGATGCGATCCGCGACGCCGATCGCGGCGACGCGGTGACAACGCTGCGTCTCGCGGGCGGCGGCTCGGTCGATCCGCGC
TGGCGCCAGTTGCTCGCCGACGCGCTCGGCGCGTCGCTGCACGCGATCGATTGCCCGAACGCCGCGACGCGCGGCGCCGC
GCTGCTCGCGGGCGTCGCGATCGGGCATTGGCGTGAAGATGCGTTGCGCGCGCTGGCGCCGGGCGCGTCGCCGATCGCCG
CCCCGCACGACGACCGCCTGCTGGCCGCCCGCCACGCGCGCTTCATCGATCTGTACGCCCGCACGGATGCATGGTTCACG
ACGGGCGTTTAA

Upstream 100 bases:

>100_bases
CCGACCGCACTTTGTATGCGTCGAGGCGGCGGCAAAAAGCGGGGCGCCCATCGCGATCCCGTTATCATCGACATCCGTTC
ACACGAATCTCCTTCACGTC

Downstream 100 bases:

>100_bases
ACTCGAACACTTGTTCTTTTGCGCCAGCGATGACGCATCCTGGCAAGCCGGCGACCGTTTCCCGCACGCGATGCGCGGCG
GGAGCGGCCATCATGGCGAG

Product: carbohydrate kinase, FGGY

Products: ADP; H+; D-Xylulose 5-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRLLGIDLGTGSVKLVTLDADGVERAVASEPYALSSPRPGWAEIAPDAWWQALVRAAARLPADERAQVAAIGFSGQMHGV
VLIDAAGQPVRPALLWPDTRAVREADAADWAAAGSPVPPNPVAPGMAGPLLRWLATHEPDALRVARWAVQPKDWLRIALG
GDVAADPSDACATALATPDGAWDNALIDTLGLPADRFAPVRASTARCGVLGAQAAAALGLPAGVPLATGAADTACAALGS
GLAAAGDALLTTGSGGQIVVLADTLPPARRGLHRYRAAAGGGYYTMAAMQNVGLALEAVRGWLGYARWADAYDEAFAQPA
SERLCFLPYLTGERSPWMNPDARGGWLGLGLADTRGAMMRAAFEGVAFALRAGLDAIRDADRGDAVTTLRLAGGGSVDPR
WRQLLADALGASLHAIDCPNAATRGAALLAGVAIGHWREDALRALAPGASPIAAPHDDRLLAARHARFIDLYARTDAWFT
TGV

Sequences:

>Translated_483_residues
MRLLGIDLGTGSVKLVTLDADGVERAVASEPYALSSPRPGWAEIAPDAWWQALVRAAARLPADERAQVAAIGFSGQMHGV
VLIDAAGQPVRPALLWPDTRAVREADAADWAAAGSPVPPNPVAPGMAGPLLRWLATHEPDALRVARWAVQPKDWLRIALG
GDVAADPSDACATALATPDGAWDNALIDTLGLPADRFAPVRASTARCGVLGAQAAAALGLPAGVPLATGAADTACAALGS
GLAAAGDALLTTGSGGQIVVLADTLPPARRGLHRYRAAAGGGYYTMAAMQNVGLALEAVRGWLGYARWADAYDEAFAQPA
SERLCFLPYLTGERSPWMNPDARGGWLGLGLADTRGAMMRAAFEGVAFALRAGLDAIRDADRGDAVTTLRLAGGGSVDPR
WRQLLADALGASLHAIDCPNAATRGAALLAGVAIGHWREDALRALAPGASPIAAPHDDRLLAARHARFIDLYARTDAWFT
TGV
>Mature_483_residues
MRLLGIDLGTGSVKLVTLDADGVERAVASEPYALSSPRPGWAEIAPDAWWQALVRAAARLPADERAQVAAIGFSGQMHGV
VLIDAAGQPVRPALLWPDTRAVREADAADWAAAGSPVPPNPVAPGMAGPLLRWLATHEPDALRVARWAVQPKDWLRIALG
GDVAADPSDACATALATPDGAWDNALIDTLGLPADRFAPVRASTARCGVLGAQAAAALGLPAGVPLATGAADTACAALGS
GLAAAGDALLTTGSGGQIVVLADTLPPARRGLHRYRAAAGGGYYTMAAMQNVGLALEAVRGWLGYARWADAYDEAFAQPA
SERLCFLPYLTGERSPWMNPDARGGWLGLGLADTRGAMMRAAFEGVAFALRAGLDAIRDADRGDAVTTLRLAGGGSVDPR
WRQLLADALGASLHAIDCPNAATRGAALLAGVAIGHWREDALRALAPGASPIAAPHDDRLLAARHARFIDLYARTDAWFT
TGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=442, Percent_Identity=24.4343891402715, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4504007, Length=442, Percent_Identity=24.6606334841629, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI189409120, Length=442, Percent_Identity=24.6606334841629, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI88196792, Length=493, Percent_Identity=23.1237322515213, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1789987, Length=420, Percent_Identity=33.3333333333333, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1790005, Length=494, Percent_Identity=29.7570850202429, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1790361, Length=470, Percent_Identity=25.531914893617, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787789, Length=462, Percent_Identity=28.3549783549784, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1789168, Length=499, Percent_Identity=23.6472945891784, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17864214, Length=472, Percent_Identity=23.9406779661017, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24654573, Length=403, Percent_Identity=24.0694789081886, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.17 [C]

Molecular weight: Translated: 49919; Mature: 49919

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLGIDLGTGSVKLVTLDADGVERAVASEPYALSSPRPGWAEIAPDAWWQALVRAAARL
CEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHC
PADERAQVAAIGFSGQMHGVVLIDAAGQPVRPALLWPDTRAVREADAADWAAAGSPVPPN
CCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEECCCHHHHHHCCCHHHHCCCCCCCCC
PVAPGMAGPLLRWLATHEPDALRVARWAVQPKDWLRIALGGDVAADPSDACATALATPDG
CCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHCCCCC
AWDNALIDTLGLPADRFAPVRASTARCGVLGAQAAAALGLPAGVPLATGAADTACAALGS
CCCHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
GLAAAGDALLTTGSGGQIVVLADTLPPARRGLHRYRAAAGGGYYTMAAMQNVGLALEAVR
CHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHH
GWLGYARWADAYDEAFAQPASERLCFLPYLTGERSPWMNPDARGGWLGLGLADTRGAMMR
HHHHHHHHHHHHHHHHHCCHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHH
AAFEGVAFALRAGLDAIRDADRGDAVTTLRLAGGGSVDPRWRQLLADALGASLHAIDCPN
HHHHHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCC
AATRGAALLAGVAIGHWREDALRALAPGASPIAAPHDDRLLAARHARFIDLYARTDAWFT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCEEE
TGV
CCC
>Mature Secondary Structure
MRLLGIDLGTGSVKLVTLDADGVERAVASEPYALSSPRPGWAEIAPDAWWQALVRAAARL
CEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHC
PADERAQVAAIGFSGQMHGVVLIDAAGQPVRPALLWPDTRAVREADAADWAAAGSPVPPN
CCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEECCCHHHHHHCCCHHHHCCCCCCCCC
PVAPGMAGPLLRWLATHEPDALRVARWAVQPKDWLRIALGGDVAADPSDACATALATPDG
CCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCHHHHHHHCCCCC
AWDNALIDTLGLPADRFAPVRASTARCGVLGAQAAAALGLPAGVPLATGAADTACAALGS
CCCHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
GLAAAGDALLTTGSGGQIVVLADTLPPARRGLHRYRAAAGGGYYTMAAMQNVGLALEAVR
CHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHCCHHHHHHH
GWLGYARWADAYDEAFAQPASERLCFLPYLTGERSPWMNPDARGGWLGLGLADTRGAMMR
HHHHHHHHHHHHHHHHHCCHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHH
AAFEGVAFALRAGLDAIRDADRGDAVTTLRLAGGGSVDPRWRQLLADALGASLHAIDCPN
HHHHHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCC
AATRGAALLAGVAIGHWREDALRALAPGASPIAAPHDDRLLAARHARFIDLYARTDAWFT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCEEE
TGV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-Xylulose [C]

Specific reaction: ATP + D-Xylulose --> ADP + H+ + D-Xylulose 5-phosphate [C]

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA