| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is plsY
Identifier: 116690576
GI number: 116690576
Start: 2831638
End: 2832279
Strand: Reverse
Name: plsY
Synonym: Bcen2424_2556
Alternate gene names: 116690576
Gene position: 2832279-2831638 (Counterclockwise)
Preceding gene: 116690577
Following gene: 116690574
Centisome position: 81.3
GC content: 68.85
Gene sequence:
>642_bases ATGCAGATCCTGCTCGCCGCCCTCGTTGCCTACCTGATCGGTTCGGTGTCGTTCGCCGTCGTTGTCAGTTCCGTGATGGG GCTGGCCGACCCGCGTTCATACGGGTCGAAGAACCCCGGCGCGACCAACGTCCTGCGCAGTGGCAACAAGAAGGCCGCGA TCCTGACGCTCGTCGGCGACGCGTTCAAGGGCTGGATCGCCGTCTGGCTCGCCCGGCACTTCGGCCTGCCCGACGTCGCG ATCGCGTGGGTCGCGATCGCCGTGTTCCTCGGCCACCTGTACCCGGTGTTCTTCCGCTTCCAGGGCGGCAAGGGCGTCGC GACCGCGGCCGGCGTGCTGCTCGCCGTGCACCCGGTGCTCGGGCTCGCGACCGCGCTGACCTGGCTGATCGTCGCGTTCT TCTTCCGCTATTCGTCGCTCGCGGCGCTGGTGGCGGCCGTGTTTGCGCCGGTGTTCGACGTATTCCTGTTCGGCATGCCG GGCCACAACCCGATCGCCTGGGCCGTGCTGGCGATGAGCGTGCTGCTCGTGTGGCGTCACCGCGGCAACATTTCGAAGCT GCTCGCGGGGCAGGAGAGCCGGATCGGCGACAAGAAGAAGGCGGCCGCGGACGGCGGCGCGCAGGACGGCGGGAAAGCCT GA
Upstream 100 bases:
>100_bases GCACCCCGCGCCCGTTCGGTAGAATGGGCGCCGTTTCGGCCTGCCGGCTTGCCGCGCCCGGCCGTTCCTTTCCCGATACG TTGAAAGAAGAGTCCTCCGC
Downstream 100 bases:
>100_bases GAAACGCGGCGCCGGGCGCGCCGCGTGTGCGGGGCCCGGCCGGATGACGCGACGGGCCGGCGGCCGGTCAGTCGCGGAAG TTGTTGAAGTCGAGCGGCGT
Product: putative glycerol-3-phosphate acyltransferase PlsY
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQILLAALVAYLIGSVSFAVVVSSVMGLADPRSYGSKNPGATNVLRSGNKKAAILTLVGDAFKGWIAVWLARHFGLPDVA IAWVAIAVFLGHLYPVFFRFQGGKGVATAAGVLLAVHPVLGLATALTWLIVAFFFRYSSLAALVAAVFAPVFDVFLFGMP GHNPIAWAVLAMSVLLVWRHRGNISKLLAGQESRIGDKKKAAADGGAQDGGKA
Sequences:
>Translated_213_residues MQILLAALVAYLIGSVSFAVVVSSVMGLADPRSYGSKNPGATNVLRSGNKKAAILTLVGDAFKGWIAVWLARHFGLPDVA IAWVAIAVFLGHLYPVFFRFQGGKGVATAAGVLLAVHPVLGLATALTWLIVAFFFRYSSLAALVAAVFAPVFDVFLFGMP GHNPIAWAVLAMSVLLVWRHRGNISKLLAGQESRIGDKKKAAADGGAQDGGKA >Mature_213_residues MQILLAALVAYLIGSVSFAVVVSSVMGLADPRSYGSKNPGATNVLRSGNKKAAILTLVGDAFKGWIAVWLARHFGLPDVA IAWVAIAVFLGHLYPVFFRFQGGKGVATAAGVLLAVHPVLGLATALTWLIVAFFFRYSSLAALVAAVFAPVFDVFLFGMP GHNPIAWAVLAMSVLLVWRHRGNISKLLAGQESRIGDKKKAAADGGAQDGGKA
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=197, Percent_Identity=44.1624365482233, Blast_Score=144, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_BURCA (Q1BU57)
Other databases:
- EMBL: CP000378 - RefSeq: YP_621821.1 - STRING: Q1BU57 - GeneID: 4092478 - GenomeReviews: CP000378_GR - KEGG: bcn:Bcen_1945 - eggNOG: COG0344 - HOGENOM: HBG734487 - OMA: HNPVAWA - ProtClustDB: PRK00220 - BioCyc: BCEN331271:BCEN_1945-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 22359; Mature: 22359
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1af74d6c)-; HASH(0x19d841f8)-; HASH(0x1d250180)-; HASH(0x1ca80e40)-; HASH(0x1c5e3084)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILLAALVAYLIGSVSFAVVVSSVMGLADPRSYGSKNPGATNVLRSGNKKAAILTLVGD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHCCCCCEEHHHHHHH AFKGWIAVWLARHFGLPDVAIAWVAIAVFLGHLYPVFFRFQGGKGVATAAGVLLAVHPVL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GLATALTWLIVAFFFRYSSLAALVAAVFAPVFDVFLFGMPGHNPIAWAVLAMSVLLVWRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RGNISKLLAGQESRIGDKKKAAADGGAQDGGKA CCCHHHHHCCCHHHCCCHHHHHCCCCCCCCCCH >Mature Secondary Structure MQILLAALVAYLIGSVSFAVVVSSVMGLADPRSYGSKNPGATNVLRSGNKKAAILTLVGD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHCCCCCEEHHHHHHH AFKGWIAVWLARHFGLPDVAIAWVAIAVFLGHLYPVFFRFQGGKGVATAAGVLLAVHPVL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GLATALTWLIVAFFFRYSSLAALVAAVFAPVFDVFLFGMPGHNPIAWAVLAMSVLLVWRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RGNISKLLAGQESRIGDKKKAAADGGAQDGGKA CCCHHHHHCCCHHHCCCHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA