Click here to switch to the map view.

The map label for this gene is 116690527

Identifier: 116690527

GI number: 116690527

Start: 2776008

End: 2777204

Strand: Reverse

Name: 116690527

Synonym: Bcen2424_2507

Alternate gene names: NA

Gene position: 2777204-2776008 (Counterclockwise)

Preceding gene: 116690528

Following gene: 116690526

Centisome position: 79.72

GC content: 62.49

Gene sequence:

>1197_bases
TTGTTGAATTCCCTGCTCGATTTTCTTTCCCACGGGCTCCTGCGTTTTTCGTGGTGGCAGGTCGCGTTGTTCGCGCTCGC
CGTCACGCACGTCACGATCATCGGCGTGACCGTCTACCTGCACCGCTGCCAGGCGCACCGCGCGCTGGAGCTGCATCCGA
TCGCGAGCCACTTCTTCCGTTTCTGGCTGTGGATGACCACCGGCATGCTGACCGGCCAGTGGGCCGCGATTCACCGCAAG
CACCACGCGAAGTGCGAGACCGAGGAAGATCCGCACAGCCCGCAGACGCGCGGCATCTGGAAGGTGTTCCTCGAGGGCGC
CGAGCTGTATCGCGCGGAAGCGAAGAACGAAGAAACGATGCGCAAGTTCAGCCACGGCACGCCGAACGACTGGCTCGAGC
GCAACGTCTACTCGAAGTACCCGATTCTCGGCATCAGCATGATGATGGTGATCGACGTCGCGCTGTTCGGCGTGCTCGGC
CTCACCGTGTGGGCCGTGCAGATGGTGTGGATCCCGTTCTGGGCGGCGGGCGTCGTCAACGGCTTCGGTCACTTCTGGGG
CTATCGCAATTTCAACTCGGCCGACGCGAGCACGAACCTGTTCCCGTGGGGCATCGTGATCGGCGGCGAAGAGCTGCACA
ACAACCACCACACGTTCGCGACGTCGGCGAAGCTGTCGAACAAGTGGTACGAGTTCGACATCGGCTGGATGTACATCCGC
ATCATGTCGGCATTCGGTCTCGCGAAGGTGAAGAAGGTCGCGCCGACGCCGCGCCTGAACAAGCCGAAGACGGTGCTCGA
CCAGGAAACGCTGCAGGCCGTGCTGTCGAACCGCTACGAAGTGATGGCGCGTTACGGCAAGGCCGTGAAGCGTGCGTACC
GCCAGGAGCTCGCGCACCTGAAGGAACTCGGTTCGAGCGAGAAGTACCAGTTGATGCGCGGCGCGCGCAAATGGTTCCAC
AAGGACGCCGACGGCCTCGACGAGCCGCAGAAGAAGCTGCTGCCGGAAATCTTCGCGAACAGCCAGAAGCTGCATACGTA
CTTCCAGCTGCGCCAGGATCTCGCCGCGATCTGGGATCGTTCGACCGCCTCGCGCGAACAGCTTCTCGCGCAATTGCAGG
ATTGGTGCCATCGCGCAGAACAAAGCGGCATCAAGGCGCTGCAGGAATTCGCGACACGCCTGCGTCGCTACGCCTGA

Upstream 100 bases:

>100_bases
CAAAGACTTGGAACGGTTGAAGTAAAATTCTGGTCTACACGCGGTATGCTTTCATTCTTCTGACGCCGGTGCGGCGTCGC
TCTCATCACAGGTAACTGCC

Downstream 100 bases:

>100_bases
TTCGAAATCGATTAGAATCTCAGGACGTCACAAACCCCGCGTTGGCGGGGTTTTTTCATTTGGGCCGCCGGTTTTTGACG
GACCGGCAGCACCGGGATTG

Product: fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Delta-9 Acyl-Lipid Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLNSLLDFLSHGLLRFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFRFWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETMRKFSHGTPNDWLERNVYSKYPILGISMMMVIDVALFGVLG
LTVWAVQMVWIPFWAAGVVNGFGHFWGYRNFNSADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHLKELGSSEKYQLMRGARKWFH
KDADGLDEPQKKLLPEIFANSQKLHTYFQLRQDLAAIWDRSTASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA

Sequences:

>Translated_398_residues
MLNSLLDFLSHGLLRFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFRFWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETMRKFSHGTPNDWLERNVYSKYPILGISMMMVIDVALFGVLG
LTVWAVQMVWIPFWAAGVVNGFGHFWGYRNFNSADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHLKELGSSEKYQLMRGARKWFH
KDADGLDEPQKKLLPEIFANSQKLHTYFQLRQDLAAIWDRSTASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA
>Mature_398_residues
MLNSLLDFLSHGLLRFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFRFWLWMTTGMLTGQWAAIHRK
HHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETMRKFSHGTPNDWLERNVYSKYPILGISMMMVIDVALFGVLG
LTVWAVQMVWIPFWAAGVVNGFGHFWGYRNFNSADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHLKELGSSEKYQLMRGARKWFH
KDADGLDEPQKKLLPEIFANSQKLHTYFQLRQDLAAIWDRSTASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321383, Length=240, Percent_Identity=25.4166666666667, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46149; Mature: 46149

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSLLDFLSHGLLRFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FWLWMTTGMLTGQWAAIHRKHHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETM
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
RKFSHGTPNDWLERNVYSKYPILGISMMMVIDVALFGVLGLTVWAVQMVWIPFWAAGVVN
HHHCCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFGHFWGYRNFNSADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
HHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHHHHCCCCEEECHHHHHHH
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELGSSEKYQLMRGARKWFHKDADGLDEPQKKLLPEIFANSQKLHTYFQLRQDLAAIWDR
HHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
STASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNSLLDFLSHGLLRFSWWQVALFALAVTHVTIIGVTVYLHRCQAHRALELHPIASHFFR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FWLWMTTGMLTGQWAAIHRKHHAKCETEEDPHSPQTRGIWKVFLEGAELYRAEAKNEETM
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
RKFSHGTPNDWLERNVYSKYPILGISMMMVIDVALFGVLGLTVWAVQMVWIPFWAAGVVN
HHHCCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFGHFWGYRNFNSADASTNLFPWGIVIGGEELHNNHHTFATSAKLSNKWYEFDIGWMYIR
HHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHHHHCCCCEEECHHHHHHH
IMSAFGLAKVKKVAPTPRLNKPKTVLDQETLQAVLSNRYEVMARYGKAVKRAYRQELAHL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELGSSEKYQLMRGARKWFHKDADGLDEPQKKLLPEIFANSQKLHTYFQLRQDLAAIWDR
HHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
STASREQLLAQLQDWCHRAEQSGIKALQEFATRLRRYA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA