| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is nadA [H]
Identifier: 116690526
GI number: 116690526
Start: 2774561
End: 2775697
Strand: Reverse
Name: nadA [H]
Synonym: Bcen2424_2506
Alternate gene names: 116690526
Gene position: 2775697-2774561 (Counterclockwise)
Preceding gene: 116690527
Following gene: 116690525
Centisome position: 79.67
GC content: 65.61
Gene sequence:
>1137_bases ATGCAATCGACGATCAAACCCGTCGAGTACGACCGGCCCGTCGCAGCAGGGACCGTGTGCGGCGTCGGACAGGCATGGGC CAAGGTGCCCGACGCGCCGTCCGCCGAGGAGCGCGCTGCGCTGAAGGCACGCATCAAGGCGCTGCTCGCCCGTGAAAAGG CCGTGCTCGTCGCCCACTACTACGTGGATGCCGAACTGCAGGAACTGGCCGACGAAACGGGCGGCTGCGTGGCCGATTCG CTCGAAATGGCCCGCTTCGGCCGTGACCACGACGCGCAGACGCTGATCGTTGCCGGCGTGCGCTTCATGGGCGAAACCGC GAAGATCCTGAGCCCGAACAAACGGATCCTGATGCCCGATCTCGATGCGACCTGTTCGCTCGACCTCGGCTGCCCGGTCG ACGAATTCTCGGCATTCTGCGATGCGCATCCGGACCGTACCGTCGTCGTCTACGCGAACACCAGCGCTGCCGTGAAGGCG CGCGCGGACTGGATGGTCACGTCGTCGATCGGTCTCGAGATCGTGGCCGACCTGCACGCGCGCGGCGAAAAGATCATCTG GGCGCCGGACCGTCATCTCGGCAGCTATATCCAGAAGAAGACCGGCGCGGATATGCTGCTGTGGCAGGGCTCGTGTCTCG TCCACGACGAATTCAAGGGCATCGAGCTCGACCTGCTGCGCGCCGAATATCCGGACGCGAAGGTGCTCGTCCACCCCGAG TCGCCGGAAAACGTCGTCGCGCAGGCCGATGTCGTCGGTTCGACCACGCAATTGATCGACGCGGCCGTCAAGTTCGATGC GAAGCGTTTCATCGTCGCGACGGATCTCGGCATCCTGCACAAGATGCAGCTGGCCGCGCCCGGCAAGACCTTCATTGCCG CGCCGACGGCCGGCAACAGCGCGACCTGCAAGAGCTGCGCGCACTGCCCGTGGATGGCGATGAACGGCCTCGCGAACCTC GCCGACGTGCTCGAACGCGGTCACAACGAGATCTTCGTCGATCCCGCGATCGGCGAGCGTGCGCGTTTGCCGATCGACCG GATGCTCGAATTCGCGGCTGCGCACAAGAAGCGCGTGCAGGCGAGCGGCGATCTGCAGCGCGACCAGTCGCTGTTCGCGA ACGTGGGGGCGGCATGA
Upstream 100 bases:
>100_bases GGGCATGAGTAAGCGCTGAAGCGCTAACTCCTGCCGACCGCGAAGCATGGGGCCGGAGTAAGTGCTAAAGCACTCACTCC GGCCGACAGGAGATATGGAG
Downstream 100 bases:
>100_bases GCAACGCCGTATCCCCGCTGTTCGAAGCCGTCCGCGCCCAATACGGCGCGGCATTCGACGAAGCGATCGCGCGTAACGTG GCCGACGCGATCGCCGAAGA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MQSTIKPVEYDRPVAAGTVCGVGQAWAKVPDAPSAEERAALKARIKALLAREKAVLVAHYYVDAELQELADETGGCVADS LEMARFGRDHDAQTLIVAGVRFMGETAKILSPNKRILMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTSAAVKA RADWMVTSSIGLEIVADLHARGEKIIWAPDRHLGSYIQKKTGADMLLWQGSCLVHDEFKGIELDLLRAEYPDAKVLVHPE SPENVVAQADVVGSTTQLIDAAVKFDAKRFIVATDLGILHKMQLAAPGKTFIAAPTAGNSATCKSCAHCPWMAMNGLANL ADVLERGHNEIFVDPAIGERARLPIDRMLEFAAAHKKRVQASGDLQRDQSLFANVGAA
Sequences:
>Translated_378_residues MQSTIKPVEYDRPVAAGTVCGVGQAWAKVPDAPSAEERAALKARIKALLAREKAVLVAHYYVDAELQELADETGGCVADS LEMARFGRDHDAQTLIVAGVRFMGETAKILSPNKRILMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTSAAVKA RADWMVTSSIGLEIVADLHARGEKIIWAPDRHLGSYIQKKTGADMLLWQGSCLVHDEFKGIELDLLRAEYPDAKVLVHPE SPENVVAQADVVGSTTQLIDAAVKFDAKRFIVATDLGILHKMQLAAPGKTFIAAPTAGNSATCKSCAHCPWMAMNGLANL ADVLERGHNEIFVDPAIGERARLPIDRMLEFAAAHKKRVQASGDLQRDQSLFANVGAA >Mature_378_residues MQSTIKPVEYDRPVAAGTVCGVGQAWAKVPDAPSAEERAALKARIKALLAREKAVLVAHYYVDAELQELADETGGCVADS LEMARFGRDHDAQTLIVAGVRFMGETAKILSPNKRILMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTSAAVKA RADWMVTSSIGLEIVADLHARGEKIIWAPDRHLGSYIQKKTGADMLLWQGSCLVHDEFKGIELDLLRAEYPDAKVLVHPE SPENVVAQADVVGSTTQLIDAAVKFDAKRFIVATDLGILHKMQLAAPGKTFIAAPTAGNSATCKSCAHCPWMAMNGLANL ADVLERGHNEIFVDPAIGERARLPIDRMLEFAAAHKKRVQASGDLQRDQSLFANVGAA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=326, Percent_Identity=65.0306748466258, Blast_Score=444, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 40752; Mature: 40752
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTIKPVEYDRPVAAGTVCGVGQAWAKVPDAPSAEERAALKARIKALLAREKAVLVAHY CCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEE YVDAELQELADETGGCVADSLEMARFGRDHDAQTLIVAGVRFMGETAKILSPNKRILMPD EECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCCHHHCCCCCEEEECC LDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTSAAVKARADWMVTSSIGLEIVADLHA CCCCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEECCCCCEEEEHHHC RGEKIIWAPDRHLGSYIQKKTGADMLLWQGSCLVHDEFKGIELDLLRAEYPDAKVLVHPE CCCEEEECCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCEEEECCC SPENVVAQADVVGSTTQLIDAAVKFDAKRFIVATDLGILHKMQLAAPGKTFIAAPTAGNS CCCCCEEEHHHCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEEEECCCCCC ATCKSCAHCPWMAMNGLANLADVLERGHNEIFVDPAIGERARLPIDRMLEFAAAHKKRVQ CCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH ASGDLQRDQSLFANVGAA CCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQSTIKPVEYDRPVAAGTVCGVGQAWAKVPDAPSAEERAALKARIKALLAREKAVLVAHY CCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEE YVDAELQELADETGGCVADSLEMARFGRDHDAQTLIVAGVRFMGETAKILSPNKRILMPD EECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCCHHHCCCCCEEEECC LDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTSAAVKARADWMVTSSIGLEIVADLHA CCCCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEECCCCCEEEEHHHC RGEKIIWAPDRHLGSYIQKKTGADMLLWQGSCLVHDEFKGIELDLLRAEYPDAKVLVHPE CCCEEEECCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCEEEEEECCCCCCEEEECCC SPENVVAQADVVGSTTQLIDAAVKFDAKRFIVATDLGILHKMQLAAPGKTFIAAPTAGNS CCCCCEEEHHHCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEEEECCCCCC ATCKSCAHCPWMAMNGLANLADVLERGHNEIFVDPAIGERARLPIDRMLEFAAAHKKRVQ CCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH ASGDLQRDQSLFANVGAA CCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA