| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690353
Identifier: 116690353
GI number: 116690353
Start: 2594667
End: 2595527
Strand: Direct
Name: 116690353
Synonym: Bcen2424_2332
Alternate gene names: NA
Gene position: 2594667-2595527 (Clockwise)
Preceding gene: 116690350
Following gene: 116690354
Centisome position: 74.48
GC content: 64.81
Gene sequence:
>861_bases ATGAAGAAGAGCGTCGCCATGCGTTTCGAAGGGTCCTCGCACTACGTCGCCACCGACGATCTGAAGCTCGCGGTCAATGC CGCGCTGACGCTGCAACGCCCGCTGCTGATCAAGGGCGAGCCCGGCACCGGCAAGACCATGCTGGCCGAGGAAGTGGCCG CCGCGCTCGACATGCCGCTGCTGCAGTGGCACATCAAGTCGACCACCAAGGCGCAGCAGGGCCTGTACGAATACGACGCC GTGTCGCGGCTGCGCGATTCGCAGCTGGGCGACGAGCGCGTCAAGGACATCGCGAACTACATCGTCAAGGGCGTGCTGTG GCAGGCGTTCGACGCCGAGCAGCCGAGCGTGCTGCTGATCGACGAGATCGACAAGGCCGACATCGAATTCCCGAACGACC TGCTGCGCGAGCTCGACCGGATGGAGTTCCACGTGTACGAGACGCGCGAGACGGTCCGCGCGAAGCACCGCCCGCTCGTC ATCATCACGTCGAACAACGAGAAGGAGCTGCCCGACGCATTCCTGCGCCGCTGCTTCTTCCACTACATCCAGTTTCCCGA TCCGTCGACGATGCAGAAGATCGTCGCGGTGCACTTCCCCGACATCCGCGAGGAACTGCTGCGCGCGGCGCTCGAGAGTT TCTTCGAATTGCGCGGCGTGTCGGGCCTGAAGAAGAAGCCGTCGACGTCCGAACTGCTCGACTGGCTGAAGCTGCTGCTC GCCGAGAACATCCCGGCCGACGCGCTGCGCGGCGCGGACGCGAAGCAGATCGTGCCGCCGCTCGCGGGCGCGCTGCTGAA GAACGAGCAGGATCTGAGCCTGCTCGAGCGGCTCGTCTACATGAACCGGCACAACCGGTAA
Upstream 100 bases:
>100_bases TCCATACGGCGCCCCGGTTCGCCCCGCCACAGCCCTGCAACGATACGCGGGCGCGGCCCGCCCGGACAGCCCTTCTGACT TATACTGGGTTTTTTCCCCG
Downstream 100 bases:
>100_bases TCCTCCCTCACCCCGCGAAGGCCCGGCCATGCTGCTCAATTTCTTCTACGCGCTGCGCGCAGCCAAGCTGCCCGTCTCGG TGAAGGAATACCTGACGCTG
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA Family ATPase; ATPase AAA Family Protein; AAA ATPase; ATPase-Like Protein; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; MoxR Family ATPase; ATPase Aaa Family; ATPase Protein; Aaa ATPase; ClpA/ClpB Family Protein; Oxidoreductase; AAA ATPase Central RegionATPase; AAA ATPase Family Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; MoxR-Like ATPase CoxD; CoxD-Like Protein; ATP-Dependent Protease Subunit
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKKSVAMRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIKSTTKAQQGLYEYDA VSRLRDSQLGDERVKDIANYIVKGVLWQAFDAEQPSVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLV IITSNNEKELPDAFLRRCFFHYIQFPDPSTMQKIVAVHFPDIREELLRAALESFFELRGVSGLKKKPSTSELLDWLKLLL AENIPADALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR
Sequences:
>Translated_286_residues MKKSVAMRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIKSTTKAQQGLYEYDA VSRLRDSQLGDERVKDIANYIVKGVLWQAFDAEQPSVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLV IITSNNEKELPDAFLRRCFFHYIQFPDPSTMQKIVAVHFPDIREELLRAALESFFELRGVSGLKKKPSTSELLDWLKLLL AENIPADALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR >Mature_286_residues MKKSVAMRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPLLQWHIKSTTKAQQGLYEYDA VSRLRDSQLGDERVKDIANYIVKGVLWQAFDAEQPSVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLV IITSNNEKELPDAFLRRCFFHYIQFPDPSTMQKIVAVHFPDIREELLRAALESFFELRGVSGLKKKPSTSELLDWLKLLL AENIPADALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32577; Mature: 32577
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVAMRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPL CCCCEEEEECCCCCEEECCCHHHHHHHHHEECCCEEEECCCCCCHHHHHHHHHHHHCCHH LQWHIKSTTKAQQGLYEYDAVSRLRDSQLGDERVKDIANYIVKGVLWQAFDAEQPSVLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE DEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLVIITSNNEKELPDAFLRRCFF ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH HYIQFPDPSTMQKIVAVHFPDIREELLRAALESFFELRGVSGLKKKPSTSELLDWLKLLL HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AENIPADALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR HCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKSVAMRFEGSSHYVATDDLKLAVNAALTLQRPLLIKGEPGTGKTMLAEEVAAALDMPL CCCCEEEEECCCCCEEECCCHHHHHHHHHEECCCEEEECCCCCCHHHHHHHHHHHHCCHH LQWHIKSTTKAQQGLYEYDAVSRLRDSQLGDERVKDIANYIVKGVLWQAFDAEQPSVLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE DEIDKADIEFPNDLLRELDRMEFHVYETRETVRAKHRPLVIITSNNEKELPDAFLRRCFF ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH HYIQFPDPSTMQKIVAVHFPDIREELLRAALESFFELRGVSGLKKKPSTSELLDWLKLLL HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AENIPADALRGADAKQIVPPLAGALLKNEQDLSLLERLVYMNRHNR HCCCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA