| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690350
Identifier: 116690350
GI number: 116690350
Start: 2593075
End: 2593542
Strand: Direct
Name: 116690350
Synonym: Bcen2424_2329
Alternate gene names: NA
Gene position: 2593075-2593542 (Clockwise)
Preceding gene: 116690348
Following gene: 116690353
Centisome position: 74.43
GC content: 67.09
Gene sequence:
>468_bases ATGATGCCATCCGAATCACGACGTTTCCCCACCATGTTCAATCCAAGCCGCGACGACGTGCGTCGCTTTTTCACCGAGAC CTGGCGCAAGCAGCGCGCGGGCGAGATCCTCACGCCGCTGGAAGCGATCGCGGCCGACTGGATCGTCGAGCATCCCGAGT ACCACGACGAACTGGCCGATGCCGACGGCGCGGCGGCGCGCAACTACACGCCCGAGGAAGGCCGCACCAACCCGTTCCTG CACCTGTCGATGCACCTCGCGATCAGCGAGCAGTTGTCGATCGACCAGCCGCCCGGCATCCGCGCCGCGCACGACAAGCT GGCCGCGAAGCTCGACTCGACCCACGACGCGCAGCACGCGATCATGGAATGCCTCGGCGAGACGATCTGGGAAGCGCAGC GCACCAACACGCCGCCCGATACCGACGCGTACCTGCAGCGCATCCTGCGCCGCGCGTCGCGCGACTGA
Upstream 100 bases:
>100_bases TACCCGTTGCGCGGCGGGCGGCCGCGCGTTCCGCGCCGACCGCTCCCGGGGGCCGGCGCCAGCGCCGTCCGTCGCGCCGG CGTACAATGCCCGACGCGGC
Downstream 100 bases:
>100_bases GCGCGCAGGCCCGGCACATCCCGCCGCACCGAGCCGCGGACAGCCGCGCCGCAGACAAAAAAATACCCCGCCGAGGCGGG GCATTCTTGCTGCGCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MMPSESRRFPTMFNPSRDDVRRFFTETWRKQRAGEILTPLEAIAADWIVEHPEYHDELADADGAAARNYTPEEGRTNPFL HLSMHLAISEQLSIDQPPGIRAAHDKLAAKLDSTHDAQHAIMECLGETIWEAQRTNTPPDTDAYLQRILRRASRD
Sequences:
>Translated_155_residues MMPSESRRFPTMFNPSRDDVRRFFTETWRKQRAGEILTPLEAIAADWIVEHPEYHDELADADGAAARNYTPEEGRTNPFL HLSMHLAISEQLSIDQPPGIRAAHDKLAAKLDSTHDAQHAIMECLGETIWEAQRTNTPPDTDAYLQRILRRASRD >Mature_155_residues MMPSESRRFPTMFNPSRDDVRRFFTETWRKQRAGEILTPLEAIAADWIVEHPEYHDELADADGAAARNYTPEEGRTNPFL HLSMHLAISEQLSIDQPPGIRAAHDKLAAKLDSTHDAQHAIMECLGETIWEAQRTNTPPDTDAYLQRILRRASRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17736; Mature: 17736
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPSESRRFPTMFNPSRDDVRRFFTETWRKQRAGEILTPLEAIAADWIVEHPEYHDELAD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHC ADGAAARNYTPEEGRTNPFLHLSMHLAISEQLSIDQPPGIRAAHDKLAAKLDSTHDAQHA CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH IMECLGETIWEAQRTNTPPDTDAYLQRILRRASRD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MMPSESRRFPTMFNPSRDDVRRFFTETWRKQRAGEILTPLEAIAADWIVEHPEYHDELAD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHC ADGAAARNYTPEEGRTNPFLHLSMHLAISEQLSIDQPPGIRAAHDKLAAKLDSTHDAQHA CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH IMECLGETIWEAQRTNTPPDTDAYLQRILRRASRD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA