Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690354

Identifier: 116690354

GI number: 116690354

Start: 2595556

End: 2596731

Strand: Direct

Name: 116690354

Synonym: Bcen2424_2333

Alternate gene names: NA

Gene position: 2595556-2596731 (Clockwise)

Preceding gene: 116690353

Following gene: 116690355

Centisome position: 74.5

GC content: 65.14

Gene sequence:

>1176_bases
ATGCTGCTCAATTTCTTCTACGCGCTGCGCGCAGCCAAGCTGCCCGTCTCGGTGAAGGAATACCTGACGCTGCTCGAATC
GCTGAAGGCCGGGCTGATCTCGCCGTCGATCGACGCGTTCTACTTCCTCGCGCGGATGACGCTCGTCAAGGACGAGCAGT
ACTTCGACAAGTTCGACCAGGCGTTCGGTGCGTATTTCCATGGCGTGTCCACGCTACCGTCCGAGGCGTTCGACATCCCG
CTCGACTGGCTCGAGAAGCGCCTCGAGCGCGAACTGTCGCCGGAGGAGAAGGCGCAGATCGACGCGATGGGCGGGCTCGA
CAAGCTGATGGAGCGTTTGAAGGCGCTGCTCGACGAGCAGAAGGAACGCCACGAAGGCGGCAACAAGTGGATCGGCACGG
GCGGCACGTCGCCGTTCGGGCACGGCGGCTACAACCCGGAAGGCGTGCGCATCGGCGGCCCGTCGAACGGCAACCGCACC
GCGGTGAAGGTGTGGGAAGCACGCGCGTACCGCGACTACGACGATTCGGTCGAGATCGGCACGCGCAACATCAAGGTCGC
GCTGCGGCGGCTGCGCCGCTTCGCGCGCGAAGGCGCCGCCGAGGAGCTCGACCTGCCCGGCACGATCCGCAGCACGGCCG
CGAACGCGGGCTGGCTCGACCTGCGGATGGTGCCCGAGCGCCACAACAACGTGAAGGTGCTGATGCTGCTGGACGTCGGC
GGCTCGATGGACGACCACATCAAGCGCACCGAAGAGCTGTTCTCGGCCGCGAAGGCCGAATTCAAGCACCTCGAATTCTT
CTACTTCCACAACTGCGTGTACGACCACCTGTGGAAGAACAACCGCCGCCGCCACGCGGAACGCACCGCGACGTGGGACG
TACTGCACAAGTTCACGCCCGACTACAAGCTGATCTTCGTCGGCGACGCGACGATGAGCCCGTACGAAGTGCTGCAGCCC
GGCGGCTCGGTCGAATACAACAACCCGGAAGCCGGCGCCGTGTGGCTGCGTCGTCTCGCCGACCAGTTTCCGCATCATGC
ATGGCTGAACCCCGAGCCCGAGCGACTATGGGAGTACCGGCAGTCGGTCGCGGTCATCCGCGACCTGCTCGGCCATCGCA
TGTATCCGCTCACGCTCGCGGGCCTCGAAACCGCGATGCGCGCACTCAGCAAGTAA

Upstream 100 bases:

>100_bases
GCGCTGCTGAAGAACGAGCAGGATCTGAGCCTGCTCGAGCGGCTCGTCTACATGAACCGGCACAACCGGTAATCCTCCCT
CACCCCGCGAAGGCCCGGCC

Downstream 100 bases:

>100_bases
CGACACCCACTCGCAGATATACAGGCCGCATCCGAGCGGCCGCCCCGGAGAGAGCATGAACCCTTCGTCCACCGCGAGTG
CCGGCCGCGCCGGCGGCCGC

Product: VWA containing CoxE family protein

Products: NA

Alternate protein names: Cytoplasmic Protein; VWA Containing CoxE-Like Family Protein; Von Willebrand Factor Type A(VWA) Domain Protein

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLLNFFYALRAAKLPVSVKEYLTLLESLKAGLISPSIDAFYFLARMTLVKDEQYFDKFDQAFGAYFHGVSTLPSEAFDIP
LDWLEKRLERELSPEEKAQIDAMGGLDKLMERLKALLDEQKERHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRT
AVKVWEARAYRDYDDSVEIGTRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIKRTEELFSAAKAEFKHLEFFYFHNCVYDHLWKNNRRRHAERTATWDVLHKFTPDYKLIFVGDATMSPYEVLQP
GGSVEYNNPEAGAVWLRRLADQFPHHAWLNPEPERLWEYRQSVAVIRDLLGHRMYPLTLAGLETAMRALSK

Sequences:

>Translated_391_residues
MLLNFFYALRAAKLPVSVKEYLTLLESLKAGLISPSIDAFYFLARMTLVKDEQYFDKFDQAFGAYFHGVSTLPSEAFDIP
LDWLEKRLERELSPEEKAQIDAMGGLDKLMERLKALLDEQKERHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRT
AVKVWEARAYRDYDDSVEIGTRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIKRTEELFSAAKAEFKHLEFFYFHNCVYDHLWKNNRRRHAERTATWDVLHKFTPDYKLIFVGDATMSPYEVLQP
GGSVEYNNPEAGAVWLRRLADQFPHHAWLNPEPERLWEYRQSVAVIRDLLGHRMYPLTLAGLETAMRALSK
>Mature_391_residues
MLLNFFYALRAAKLPVSVKEYLTLLESLKAGLISPSIDAFYFLARMTLVKDEQYFDKFDQAFGAYFHGVSTLPSEAFDIP
LDWLEKRLERELSPEEKAQIDAMGGLDKLMERLKALLDEQKERHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRT
AVKVWEARAYRDYDDSVEIGTRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIKRTEELFSAAKAEFKHLEFFYFHNCVYDHLWKNNRRRHAERTATWDVLHKFTPDYKLIFVGDATMSPYEVLQP
GGSVEYNNPEAGAVWLRRLADQFPHHAWLNPEPERLWEYRQSVAVIRDLLGHRMYPLTLAGLETAMRALSK

Specific function: Unknown

COG id: COG3825

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44761; Mature: 44761

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNFFYALRAAKLPVSVKEYLTLLESLKAGLISPSIDAFYFLARMTLVKDEQYFDKFDQ
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFGAYFHGVSTLPSEAFDIPLDWLEKRLERELSPEEKAQIDAMGGLDKLMERLKALLDEQ
HHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
KERHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRTAVKVWEARAYRDYDDSVEIG
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEHHHHCCCCCCHHHC
TRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEEEEEECC
GSMDDHIKRTEELFSAAKAEFKHLEFFYFHNCVYDHLWKNNRRRHAERTATWDVLHKFTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
DYKLIFVGDATMSPYEVLQPGGSVEYNNPEAGAVWLRRLADQFPHHAWLNPEPERLWEYR
CEEEEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QSVAVIRDLLGHRMYPLTLAGLETAMRALSK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLNFFYALRAAKLPVSVKEYLTLLESLKAGLISPSIDAFYFLARMTLVKDEQYFDKFDQ
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFGAYFHGVSTLPSEAFDIPLDWLEKRLERELSPEEKAQIDAMGGLDKLMERLKALLDEQ
HHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
KERHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRTAVKVWEARAYRDYDDSVEIG
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEHHHHCCCCCCHHHC
TRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEEEEEECC
GSMDDHIKRTEELFSAAKAEFKHLEFFYFHNCVYDHLWKNNRRRHAERTATWDVLHKFTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
DYKLIFVGDATMSPYEVLQPGGSVEYNNPEAGAVWLRRLADQFPHHAWLNPEPERLWEYR
CEEEEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QSVAVIRDLLGHRMYPLTLAGLETAMRALSK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA