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The map label for this gene is psd [H]

Identifier: 116690283

GI number: 116690283

Start: 2517240

End: 2517884

Strand: Reverse

Name: psd [H]

Synonym: Bcen2424_2262

Alternate gene names: 116690283

Gene position: 2517884-2517240 (Counterclockwise)

Preceding gene: 116690284

Following gene: 116690282

Centisome position: 72.27

GC content: 65.12

Gene sequence:

>645_bases
ATGAACTATCCTCATCCGATCATCGCGCGCGAAGGCTGGCCGTTCATCGCGATTGCAGCCGTCGTCGCGCTGTTGATCCA
TGCCGTCGGGGGCTTCGGCTTCGCGTGGCCGTTCTGGCTGCTGCTCGTTTTCGTCGTCCAGTTCTTCCGCGATCCGCAGC
GCCCGATCCCGGCGCAGCCGAACGCGGTGCTGTGCCCGGCAGACGGCCGCATCGTCGCGGTCGAGACCGCGCAGGATCCG
TACGCGAACCGCGAAGCGCTGAAGATCAGCGTGTTCATGAATGTCTTCAATGTCCATTCGCAGCGTTCGCCGGTCGATGG
CGCGATCAGCAAGGTCGAGTACTTCCCGGGTGCGTTCCTGAACGCGGCGATCGACAAGGCGTCGACGGAGAACGAGCGCA
ATGCGGTCGTGATCCAGACGGCGAGCGGCAAGACCGTCACGTCCGTGCAGATCGCCGGCCTGATCGCCCGCCGGATACTC
TGCTACGTGCGCGCCGGTGAGCCGCTGTCGCGCGGCCAGCGTTACGGGTTCATCCGCTTCGGTTCGCGCGTCGACGTGTA
CCTGCCGCTTGGCAGCCGCGCGAAGGTGTCGATCGGCGAGAAGGTCTACGCGTCGTCGACGATCCTCGCCGAGCTCGAAC
AGTAA

Upstream 100 bases:

>100_bases
GTGGAGGGTCGGCATCAAAAAGCCGTCCGAAGGCAGCAGTGCCCCGGGCGGCTTTTGTTATGCTACGTGCTTTGCAATTC
ACCGAACACAGAACGAATCC

Downstream 100 bases:

>100_bases
GCGGCGGGGCGCACGATGGCCGCATTCAAACCGCGTCGGCCGCGTAACGGCTCCGGCCAGACGCCACGCCCGTTCCGCCG
CAACAAGGTGATGGCGCCCG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGFAWPFWLLLVFVVQFFRDPQRPIPAQPNAVLCPADGRIVAVETAQDP
YANREALKISVFMNVFNVHSQRSPVDGAISKVEYFPGAFLNAAIDKASTENERNAVVIQTASGKTVTSVQIAGLIARRIL
CYVRAGEPLSRGQRYGFIRFGSRVDVYLPLGSRAKVSIGEKVYASSTILAELEQ

Sequences:

>Translated_214_residues
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGFAWPFWLLLVFVVQFFRDPQRPIPAQPNAVLCPADGRIVAVETAQDP
YANREALKISVFMNVFNVHSQRSPVDGAISKVEYFPGAFLNAAIDKASTENERNAVVIQTASGKTVTSVQIAGLIARRIL
CYVRAGEPLSRGQRYGFIRFGSRVDVYLPLGSRAKVSIGEKVYASSTILAELEQ
>Mature_214_residues
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGFAWPFWLLLVFVVQFFRDPQRPIPAQPNAVLCPADGRIVAVETAQDP
YANREALKISVFMNVFNVHSQRSPVDGAISKVEYFPGAFLNAAIDKASTENERNAVVIQTASGKTVTSVQIAGLIARRIL
CYVRAGEPLSRGQRYGFIRFGSRVDVYLPLGSRAKVSIGEKVYASSTILAELEQ

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 23446; Mature: 23446

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGFAWPFWLLLVFVVQFFRDPQRPIPAQP
CCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
NAVLCPADGRIVAVETAQDPYANREALKISVFMNVFNVHSQRSPVDGAISKVEYFPGAFL
CEEEECCCCCEEEEEECCCCCCCCHHEEEEEEHHHHHHCCCCCCCHHHHHHHHHCCCHHH
NAAIDKASTENERNAVVIQTASGKTVTSVQIAGLIARRILCYVRAGEPLSRGQRYGFIRF
HHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEE
GSRVDVYLPLGSRAKVSIGEKVYASSTILAELEQ
CCEEEEEEECCCCCEEECCCCHHHCHHHEEEECC
>Mature Secondary Structure
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGFAWPFWLLLVFVVQFFRDPQRPIPAQP
CCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
NAVLCPADGRIVAVETAQDPYANREALKISVFMNVFNVHSQRSPVDGAISKVEYFPGAFL
CEEEECCCCCEEEEEECCCCCCCCHHEEEEEEHHHHHHCCCCCCCHHHHHHHHHCCCHHH
NAAIDKASTENERNAVVIQTASGKTVTSVQIAGLIARRILCYVRAGEPLSRGQRYGFIRF
HHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEE
GSRVDVYLPLGSRAKVSIGEKVYASSTILAELEQ
CCEEEEEEECCCCCEEECCCCHHHCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA