| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pssA [H]
Identifier: 116690282
GI number: 116690282
Start: 2516352
End: 2517224
Strand: Reverse
Name: pssA [H]
Synonym: Bcen2424_2261
Alternate gene names: 116690282
Gene position: 2517224-2516352 (Counterclockwise)
Preceding gene: 116690283
Following gene: 116690281
Centisome position: 72.25
GC content: 68.16
Gene sequence:
>873_bases ATGGCCGCATTCAAACCGCGTCGGCCGCGTAACGGCTCCGGCCAGACGCCACGCCCGTTCCGCCGCAACAAGGTGATGGC GCCCGATGCGGCGCCGCTCGAGAGCCGCCGCGCCGCGCGCCAGCGGTTCCTGAAGACGCGCGGCATCTATCTGCTGCCGA ACGCATTCACGACCGCCGCGCTGTTCTGCGGCTTCTTCGCGGTTGTGCAGGCGATGAACGTACGCTTCGAGATCGCCGCG ATCGCGATTTTCGTGGCGATGGTGCTCGACGGGATGGACGGGCGCGTCGCGCGCATGACCCATACGCAGAGCGCGTTCGG CGAGCAGTTCGATAGCCTTTCCGACATGGTGTCGTTCGGCGTCGCGCCCGCGCTCGTGATGTACGAGTGGGTGCTGAAGG ATCTCGGCCGCTGGGGCTGGCTCGCCGCGTTCGTCTATTGCTCGGGCGCCGCGCTGCGCCTCGCGCGCTTCAACACGAAC ATCGGCGTGGTCGACAAGCGCTTCTTCCAGGGGTTGCCGAGCCCGGCCGCCGCCGCGCTGATCGCCGGCTTCGTGTGGCT CGCGACCGACAACCGCGTGCCGATGAAGCTCGGCTGGCTGCCGTGGGTCGCGTTCGTGCTGACGATCTACGCGGGCGTGA CGATGGTGTCGAACGCGCCGTTCTACAGCGGCAAGGCGCTCGACGTGCGGCACCGCGTGCCGTTCGCGGCGATCCTGCTC GTCGTCGTCGCGTTCGTGCTCGTGTCGTCCGATCCGCCGCTGATGCTGTTCTGCCTGTTCGTGCTGTACGGTCTGTCCGG CTACGTGTTCTGGGCCTACATGGCCATCCGCGGGCGCGCGAATCCGGCGCGCTCGTCGCAGCGCGATCACTGA
Upstream 100 bases:
>100_bases CCTGCCGCTTGGCAGCCGCGCGAAGGTGTCGATCGGCGAGAAGGTCTACGCGTCGTCGACGATCCTCGCCGAGCTCGAAC AGTAAGCGGCGGGGCGCACG
Downstream 100 bases:
>100_bases CGCCGACGCACGATTTGCCCGGAAACGGCGGTCTCGGGGCCGCCGTTTTCATTTGCCCCTTTTTCGAGCCGGGCCGCGCC GGTTCACGGTTTCCGGGTGC
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAAFKPRRPRNGSGQTPRPFRRNKVMAPDAAPLESRRAARQRFLKTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEIAA IAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTN IGVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL VVVAFVLVSSDPPLMLFCLFVLYGLSGYVFWAYMAIRGRANPARSSQRDH
Sequences:
>Translated_290_residues MAAFKPRRPRNGSGQTPRPFRRNKVMAPDAAPLESRRAARQRFLKTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEIAA IAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTN IGVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL VVVAFVLVSSDPPLMLFCLFVLYGLSGYVFWAYMAIRGRANPARSSQRDH >Mature_289_residues AAFKPRRPRNGSGQTPRPFRRNKVMAPDAAPLESRRAARQRFLKTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEIAAI AIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNI GVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLV VVAFVLVSSDPPLMLFCLFVLYGLSGYVFWAYMAIRGRANPARSSQRDH
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=175, Percent_Identity=31.4285714285714, Blast_Score=83, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 32119; Mature: 31988
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFKPRRPRNGSGQTPRPFRRNKVMAPDAAPLESRRAARQRFLKTRGIYLLPNAFTTAA CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHH LFCGFFAVVQAMNVRFEIAAIAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGLPSPAAAAL HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEEHCCCCCCCCHHHHHCCCCCHHHHHH IAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL HHHHHHEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCHHHHHH VVVAFVLVSSDPPLMLFCLFVLYGLSGYVFWAYMAIRGRANPARSSQRDH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AAFKPRRPRNGSGQTPRPFRRNKVMAPDAAPLESRRAARQRFLKTRGIYLLPNAFTTAA CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHH LFCGFFAVVQAMNVRFEIAAIAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGLPSPAAAAL HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEEHCCCCCCCCHHHHHCCCCCHHHHHH IAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL HHHHHHEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCHHHHHH VVVAFVLVSSDPPLMLFCLFVLYGLSGYVFWAYMAIRGRANPARSSQRDH HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]