| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690205
Identifier: 116690205
GI number: 116690205
Start: 2433629
End: 2434738
Strand: Direct
Name: 116690205
Synonym: Bcen2424_2184
Alternate gene names: NA
Gene position: 2433629-2434738 (Clockwise)
Preceding gene: 116690203
Following gene: 116690207
Centisome position: 69.85
GC content: 64.95
Gene sequence:
>1110_bases ATGAGCCAACCCGCACGAACCACCTTTCGCCACGACGCAGACAGGGTCGCGTACGTCCGCCGCGAAGTGAACGCCGCGAG CGACGCGATCCGCGCACGCTTTCCGCTGCTCGACAACCAGAACCTCGTCGGCGCGACCGTGATGGCCGTGTCGGTGAGCG CGATGCTCGCGATCGCATGGCTGTATGCGCGTGGCGCGATCGCGTGGTACGTCGCGCTGCCGCTCGCCGCGTTCATCACG TCGCTGATCCACGAGCTCGAGCACGACCTGATCCACCTGATGTACTTCAAGAAGACGCCGTGGGCGTATCACCTGATGAT GGCGCTGTGCTGGCTCACGCGGCCCGGCACGATCAACCCGTGGACGCGGCGACGCATGCACCTGCATCACCACAAGGTGT CGGGCGGCGAATCGGACCTGGAGGAATTCGGCATCACCAACGGCGAGCGCTGGGGCGTGAAGCGCCTGCTGATGATCGCG GACGGCATGCTCGCCGTCGTGCTGCGGCCGGCCGCGATGCGCCGCAAGGTGAAGCAATACGTGGCCGCGCAGCCGGTGCA GGACCCGTCCGAACGCCTGCAGTTGCGCATCGAGCAGCTGTCGTCGTACATGCCGATCGGTCACCTGTACTACACGCTGT GGCACGCGTTCATCGTCTATCACGTCGGCCTGTTCGCGCTGCATGCGCTCGATGTCGCGGTGACGGTGCCCGCCGTCGTC GAGCGCGTGATGAGCGTCGTCGATTTCCTGGCGGTGGTGTGGCTCGGGCCGAACTTCGTACGCAGCTTCTGTATCAACTT CGTCAGCTCGAACATGCATTATTTCGGCGACATCGACTCGCGCAACGTGATCCAGCAGACGCAGGTGCTGAACCCGTGGT GGATGCTGCCGTTCCAGCTGTTCTGCTTCAATTTCGGCAGCACGCACGCGATTCATCATTTCGTGGTGCGCGATCCGTTC TACATCCGGCAACTGACCGCGCGCCGTGCGCATGCGGCGCTGCGCGAAGTGGGCGTGCGCTTCAACGACGTCGGCACCTT CGCCCGTGCGAATCGCTGGGGCGGCTATCGTCCGTCTCGCCGCACGCACCACGCGCAGGCCGACGCGTAA
Upstream 100 bases:
>100_bases CACCGCCCTTGGCACCGACGGCCCTCGCGTGCGTTCCGGCACGCGCCTATGCTTGTCACATCGGCATTGCGCCCCACTCT TTCCGCACGGATTCCGGTCG
Downstream 100 bases:
>100_bases CGCCGGCGGCGCTCCGCGTCAGCGCCTCATCAAGCGTCGATCGGCGGCATCGGCCCCTGCCCGCGAATCCACGACCAGTT CGCGAGCTCGGCCATTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Related Protein
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSQPARTTFRHDADRVAYVRREVNAASDAIRARFPLLDNQNLVGATVMAVSVSAMLAIAWLYARGAIAWYVALPLAAFIT SLIHELEHDLIHLMYFKKTPWAYHLMMALCWLTRPGTINPWTRRRMHLHHHKVSGGESDLEEFGITNGERWGVKRLLMIA DGMLAVVLRPAAMRRKVKQYVAAQPVQDPSERLQLRIEQLSSYMPIGHLYYTLWHAFIVYHVGLFALHALDVAVTVPAVV ERVMSVVDFLAVVWLGPNFVRSFCINFVSSNMHYFGDIDSRNVIQQTQVLNPWWMLPFQLFCFNFGSTHAIHHFVVRDPF YIRQLTARRAHAALREVGVRFNDVGTFARANRWGGYRPSRRTHHAQADA
Sequences:
>Translated_369_residues MSQPARTTFRHDADRVAYVRREVNAASDAIRARFPLLDNQNLVGATVMAVSVSAMLAIAWLYARGAIAWYVALPLAAFIT SLIHELEHDLIHLMYFKKTPWAYHLMMALCWLTRPGTINPWTRRRMHLHHHKVSGGESDLEEFGITNGERWGVKRLLMIA DGMLAVVLRPAAMRRKVKQYVAAQPVQDPSERLQLRIEQLSSYMPIGHLYYTLWHAFIVYHVGLFALHALDVAVTVPAVV ERVMSVVDFLAVVWLGPNFVRSFCINFVSSNMHYFGDIDSRNVIQQTQVLNPWWMLPFQLFCFNFGSTHAIHHFVVRDPF YIRQLTARRAHAALREVGVRFNDVGTFARANRWGGYRPSRRTHHAQADA >Mature_368_residues SQPARTTFRHDADRVAYVRREVNAASDAIRARFPLLDNQNLVGATVMAVSVSAMLAIAWLYARGAIAWYVALPLAAFITS LIHELEHDLIHLMYFKKTPWAYHLMMALCWLTRPGTINPWTRRRMHLHHHKVSGGESDLEEFGITNGERWGVKRLLMIAD GMLAVVLRPAAMRRKVKQYVAAQPVQDPSERLQLRIEQLSSYMPIGHLYYTLWHAFIVYHVGLFALHALDVAVTVPAVVE RVMSVVDFLAVVWLGPNFVRSFCINFVSSNMHYFGDIDSRNVIQQTQVLNPWWMLPFQLFCFNFGSTHAIHHFVVRDPFY IRQLTARRAHAALREVGVRFNDVGTFARANRWGGYRPSRRTHHAQADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42357; Mature: 42226
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPARTTFRHDADRVAYVRREVNAASDAIRARFPLLDNQNLVGATVMAVSVSAMLAIAW CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LYARGAIAWYVALPLAAFITSLIHELEHDLIHLMYFKKTPWAYHLMMALCWLTRPGTINP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH WTRRRMHLHHHKVSGGESDLEEFGITNGERWGVKRLLMIADGMLAVVLRPAAMRRKVKQY HHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VAAQPVQDPSERLQLRIEQLSSYMPIGHLYYTLWHAFIVYHVGLFALHALDVAVTVPAVV HHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVMSVVDFLAVVWLGPNFVRSFCINFVSSNMHYFGDIDSRNVIQQTQVLNPWWMLPFQL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCCHHHHHHHH FCFNFGSTHAIHHFVVRDPFYIRQLTARRAHAALREVGVRFNDVGTFARANRWGGYRPSR HHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC RTHHAQADA CCCCCCCCC >Mature Secondary Structure SQPARTTFRHDADRVAYVRREVNAASDAIRARFPLLDNQNLVGATVMAVSVSAMLAIAW CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LYARGAIAWYVALPLAAFITSLIHELEHDLIHLMYFKKTPWAYHLMMALCWLTRPGTINP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCH WTRRRMHLHHHKVSGGESDLEEFGITNGERWGVKRLLMIADGMLAVVLRPAAMRRKVKQY HHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VAAQPVQDPSERLQLRIEQLSSYMPIGHLYYTLWHAFIVYHVGLFALHALDVAVTVPAVV HHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVMSVVDFLAVVWLGPNFVRSFCINFVSSNMHYFGDIDSRNVIQQTQVLNPWWMLPFQL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCCHHHHHHHH FCFNFGSTHAIHHFVVRDPFYIRQLTARRAHAALREVGVRFNDVGTFARANRWGGYRPSR HHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC RTHHAQADA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA