| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is fcuA [H]
Identifier: 116690207
GI number: 116690207
Start: 2435553
End: 2437871
Strand: Direct
Name: fcuA [H]
Synonym: Bcen2424_2186
Alternate gene names: 116690207
Gene position: 2435553-2437871 (Clockwise)
Preceding gene: 116690205
Following gene: 116690208
Centisome position: 69.91
GC content: 67.62
Gene sequence:
>2319_bases ATGATTCTCGTTTACGTTAGACTCCGCCGCTCGATAAAAAACGTCCGCGACAGTACGGACGCGTCACGCCGCCCGGATTC CGACTTGCCGCCCTGGGATGGATCAACGACCACACCCGATTTGCGTCCCATGTCGACACTTTCGTTACCCGTCCGGCGTC TCACGCGGATTGCCTTCGGCATTGCGCTCGCCTGCACCTTCCCGGCCGCCGCACGGGCCCAGCAGGCGACTTCCGCCGCC GTCAACGCCAATGCCGCGTCGGATGCCACCATGCTGCCGTCGATCAACGTGACCGGCGCGGCCGAGCCGCTGCCCGGCGA CCTCGCACCGACCTACGCCGGCGGCCAGGTCGCGCGCGGCGCGGATTTCGGCGTGCTCGGCCGGCAAAAGGCGAGCGACG TACCGTTCAGCATGACCACCTATACGTCGAAACTGATCGAGGACCAGCAGGCGCGCACGCTCGCCGACGTACTCGACAAC GACCCGGCCGTGCGCAGCGCCTCCGGCTACGGCAACTTCTCGCAGGTATTCGTCATCCGCGGTTTCGAGCTTGCCGGTGA CGACGTGTCGCTCAACGGCCTGTACGGCGTCACGCCGCGGCAACTCGTCCAGACCGATGCGGTCGAGCGCGTCGACGTGT TCAAGGGCGCGAATGCCTTCCTGAACGGGGCGTCGCCGAACGGCTCGGCGGTCGGCGGCGGCGTGAACCTGCAACTGAAG CGTGCGGACGACAAGCCGCTCACACGCGTCACCGTCGACGGCGCCACGTCCGGTTCGCTCGGCACGCATGTCGACATCGG CCGCCGCTTCGGCAGCGAAGGCCAGTTCGGCGTGCGCGTGAACCAGTCGATCAGCGGCGGCGACACGGCCGTCGACGACG AGCGCCGCCGCAGCAACGTGACGGCGGTGTCGCTCGACTGGCGCGGCGACAAGCTGCGACTGTCCGGCGACTTCCTGTAT CAGCGGCAGCGGATCGACAACGGCCGCCCGGTCGTGCTCGTCAGCGGCGATCAGTTGCCCGCCGTGCCGTCCGCGACGCA CAACTATGCGCAACCGTGGAGCTTCAGCGAACTCGAGGACACGGTGGGCATCGTGCGCGCCGAGTATGACTTCCTGCCCG CATGGACGGCCTACGTATCGGCTGGCGCACGCCATACGAACGAGCATGGCGACTATTACACGCCGACCTACTCGTCGTCC GGCACGACCGGCTCGCGCCTGAGCGTGCCGCACAAGGAAGATGCGCAGTCGGCCGAGGCCGGCGTACGCGGCCGCTTCAC GACCGGCCCCGTGTCGCACTTCGTGACGGCCGGCGCGTCGTTCATCCGCATCGATAGCCAGTCCGCGTACACGATGTCGA ACGCGTTCCCGACGACGCTCTACGATCCCGCGCCGATCGCGTCTCCGCCGACGGCCTACACGGGCGGCGACATGAACGAT CCGGGCACGGTCACGAAGACCTGGCTGCGCAGCCTCGCGGTGTCCGATACGCTCGGCTTCCTCGACGACCGCGTGCTGTT CACGATCGGCGCGCGCCGCCAGTCGATTTCGGTCGACAACTTCAGCTACACGGGCGCGGTCACGGGTGTCTACAGCGACG CGATCACGACGCCCGTGCTCGGTCTCGTCGTGAAGCCGTGGCGCAACGTGTCGATCTTCGCGAATCGCAGCGAAGCGCTC GCCCAGGGCGAGATCGCGCCGAACACCGCGCGCAACGCAGGCCAGGCGCTGTCGCCGTACCGGTCGAAGCAATATGAAGC CGGCATCCGCTACGACACCGACAAGTACGGTGCGTCGCTTGCGCTGTTCCAGATCGAGAAGCCGATGGCGTACACCGATC CGGCGACGAACCTGTTCGGCGCCGACGGCACGCAGCGGCACCGCGGCATCGAGACGGCCGTGTACGGCGAGCCGTGGAAA GGTGTGCGGCTGATCGCCGGCGCGACGTACCTCAACGCGACGCTGCAGAACACGGCGGGCGGCGCGAATGACGGCCACCG GCCGATCGGCGTGCCGTCGTTCCTGCTCAACGCGGGCGCCGAATACGACGTGCCGATGCTGCGCGGGCTCACGCTGACCG CGCGCTGGCTCCACACGGGGCCGCAGTACCTGGACGTCGCGAACACGATGTCGATCCAGGCGTGGGACCGCTTCGACCTC GGCGCGCGCTACGCGACAAACGTGTTCGGCAAGAAGACGACGTTGCGCGCGACCGTGCGCAATGTCGCGAACAAGTCGTA CTGGTCGTCGACGATCGGCGGATACCTGACGCAGGGCGACCCGCGCTCGGTGTGGCTGTCGATGACGACGGATTTCTGA
Upstream 100 bases:
>100_bases AACCGTAGAGTCCGTTCCGACGCCCGCTCGGCGGTCGTACACCGTCGCCCGCGAACGCCCACTTATCTCAAATAGTGGGC CGATTTTTTCGTAAACGACA
Downstream 100 bases:
>100_bases CCGACGCGGAAGGGAGTGGCGGGCTGCCGCCAGAGTTTGCTATACTCTCGGTCTTCCGGAGAGATGGATGAGTGGTTTAA GTCGCACGCCTGGAAAGCGT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 772; Mature: 772
Protein sequence:
>772_residues MILVYVRLRRSIKNVRDSTDASRRPDSDLPPWDGSTTTPDLRPMSTLSLPVRRLTRIAFGIALACTFPAAARAQQATSAA VNANAASDATMLPSINVTGAAEPLPGDLAPTYAGGQVARGADFGVLGRQKASDVPFSMTTYTSKLIEDQQARTLADVLDN DPAVRSASGYGNFSQVFVIRGFELAGDDVSLNGLYGVTPRQLVQTDAVERVDVFKGANAFLNGASPNGSAVGGGVNLQLK RADDKPLTRVTVDGATSGSLGTHVDIGRRFGSEGQFGVRVNQSISGGDTAVDDERRRSNVTAVSLDWRGDKLRLSGDFLY QRQRIDNGRPVVLVSGDQLPAVPSATHNYAQPWSFSELEDTVGIVRAEYDFLPAWTAYVSAGARHTNEHGDYYTPTYSSS GTTGSRLSVPHKEDAQSAEAGVRGRFTTGPVSHFVTAGASFIRIDSQSAYTMSNAFPTTLYDPAPIASPPTAYTGGDMND PGTVTKTWLRSLAVSDTLGFLDDRVLFTIGARRQSISVDNFSYTGAVTGVYSDAITTPVLGLVVKPWRNVSIFANRSEAL AQGEIAPNTARNAGQALSPYRSKQYEAGIRYDTDKYGASLALFQIEKPMAYTDPATNLFGADGTQRHRGIETAVYGEPWK GVRLIAGATYLNATLQNTAGGANDGHRPIGVPSFLLNAGAEYDVPMLRGLTLTARWLHTGPQYLDVANTMSIQAWDRFDL GARYATNVFGKKTTLRATVRNVANKSYWSSTIGGYLTQGDPRSVWLSMTTDF
Sequences:
>Translated_772_residues MILVYVRLRRSIKNVRDSTDASRRPDSDLPPWDGSTTTPDLRPMSTLSLPVRRLTRIAFGIALACTFPAAARAQQATSAA VNANAASDATMLPSINVTGAAEPLPGDLAPTYAGGQVARGADFGVLGRQKASDVPFSMTTYTSKLIEDQQARTLADVLDN DPAVRSASGYGNFSQVFVIRGFELAGDDVSLNGLYGVTPRQLVQTDAVERVDVFKGANAFLNGASPNGSAVGGGVNLQLK RADDKPLTRVTVDGATSGSLGTHVDIGRRFGSEGQFGVRVNQSISGGDTAVDDERRRSNVTAVSLDWRGDKLRLSGDFLY QRQRIDNGRPVVLVSGDQLPAVPSATHNYAQPWSFSELEDTVGIVRAEYDFLPAWTAYVSAGARHTNEHGDYYTPTYSSS GTTGSRLSVPHKEDAQSAEAGVRGRFTTGPVSHFVTAGASFIRIDSQSAYTMSNAFPTTLYDPAPIASPPTAYTGGDMND PGTVTKTWLRSLAVSDTLGFLDDRVLFTIGARRQSISVDNFSYTGAVTGVYSDAITTPVLGLVVKPWRNVSIFANRSEAL AQGEIAPNTARNAGQALSPYRSKQYEAGIRYDTDKYGASLALFQIEKPMAYTDPATNLFGADGTQRHRGIETAVYGEPWK GVRLIAGATYLNATLQNTAGGANDGHRPIGVPSFLLNAGAEYDVPMLRGLTLTARWLHTGPQYLDVANTMSIQAWDRFDL GARYATNVFGKKTTLRATVRNVANKSYWSSTIGGYLTQGDPRSVWLSMTTDF >Mature_772_residues MILVYVRLRRSIKNVRDSTDASRRPDSDLPPWDGSTTTPDLRPMSTLSLPVRRLTRIAFGIALACTFPAAARAQQATSAA VNANAASDATMLPSINVTGAAEPLPGDLAPTYAGGQVARGADFGVLGRQKASDVPFSMTTYTSKLIEDQQARTLADVLDN DPAVRSASGYGNFSQVFVIRGFELAGDDVSLNGLYGVTPRQLVQTDAVERVDVFKGANAFLNGASPNGSAVGGGVNLQLK RADDKPLTRVTVDGATSGSLGTHVDIGRRFGSEGQFGVRVNQSISGGDTAVDDERRRSNVTAVSLDWRGDKLRLSGDFLY QRQRIDNGRPVVLVSGDQLPAVPSATHNYAQPWSFSELEDTVGIVRAEYDFLPAWTAYVSAGARHTNEHGDYYTPTYSSS GTTGSRLSVPHKEDAQSAEAGVRGRFTTGPVSHFVTAGASFIRIDSQSAYTMSNAFPTTLYDPAPIASPPTAYTGGDMND PGTVTKTWLRSLAVSDTLGFLDDRVLFTIGARRQSISVDNFSYTGAVTGVYSDAITTPVLGLVVKPWRNVSIFANRSEAL AQGEIAPNTARNAGQALSPYRSKQYEAGIRYDTDKYGASLALFQIEKPMAYTDPATNLFGADGTQRHRGIETAVYGEPWK GVRLIAGATYLNATLQNTAGGANDGHRPIGVPSFLLNAGAEYDVPMLRGLTLTARWLHTGPQYLDVANTMSIQAWDRFDL GARYATNVFGKKTTLRATVRNVANKSYWSSTIGGYLTQGDPRSVWLSMTTDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=705, Percent_Identity=23.1205673758865, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82870; Mature: 82870
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVYVRLRRSIKNVRDSTDASRRPDSDLPPWDGSTTTPDLRPMSTLSLPVRRLTRIAFG CEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IALACTFPAAARAQQATSAAVNANAASDATMLPSINVTGAAEPLPGDLAPTYAGGQVARG HHHEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADFGVLGRQKASDVPFSMTTYTSKLIEDQQARTLADVLDNDPAVRSASGYGNFSQVFVIR CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE GFELAGDDVSLNGLYGVTPRQLVQTDAVERVDVFKGANAFLNGASPNGSAVGGGVNLQLK EEEECCCCEEECCEECCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCCEEEEEE RADDKPLTRVTVDGATSGSLGTHVDIGRRFGSEGQFGVRVNQSISGGDTAVDDERRRSNV ECCCCCCEEEEECCCCCCCCCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHCCC TAVSLDWRGDKLRLSGDFLYQRQRIDNGRPVVLVSGDQLPAVPSATHNYAQPWSFSELED EEEEEECCCCEEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH TVGIVRAEYDFLPAWTAYVSAGARHTNEHGDYYTPTYSSSGTTGSRLSVPHKEDAQSAEA HHHEEEECCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCEECCCCCHHHHHHHC GVRGRFTTGPVSHFVTAGASFIRIDSQSAYTMSNAFPTTLYDPAPIASPPTAYTGGDMND CCCCCCCCCCHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC PGTVTKTWLRSLAVSDTLGFLDDRVLFTIGARRQSISVDNFSYTGAVTGVYSDAITTPVL CCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCEECCEEEHHHHHHHHHHHH GLVVKPWRNVSIFANRSEALAQGEIAPNTARNAGQALSPYRSKQYEAGIRYDTDKYGASL HHHCCCCCCEEEEECCCHHHHCCCCCCCCHHCCCCCCCCHHHHHHCCCCCCCCHHHCCEE ALFQIEKPMAYTDPATNLFGADGTQRHRGIETAVYGEPWKGVRLIAGATYLNATLQNTAG EEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCEEEEECCHHHHHHHHCCCC GANDGHRPIGVPSFLLNAGAEYDVPMLRGLTLTARWLHTGPQYLDVANTMSIQAWDRFDL CCCCCCCCCCCHHHHHHCCCCCCCHHHCCCEEEEHHHHCCCCCEECCCCEEEEECCCCCC GARYATNVFGKKTTLRATVRNVANKSYWSSTIGGYLTQGDPRSVWLSMTTDF CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCC >Mature Secondary Structure MILVYVRLRRSIKNVRDSTDASRRPDSDLPPWDGSTTTPDLRPMSTLSLPVRRLTRIAFG CEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IALACTFPAAARAQQATSAAVNANAASDATMLPSINVTGAAEPLPGDLAPTYAGGQVARG HHHEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADFGVLGRQKASDVPFSMTTYTSKLIEDQQARTLADVLDNDPAVRSASGYGNFSQVFVIR CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE GFELAGDDVSLNGLYGVTPRQLVQTDAVERVDVFKGANAFLNGASPNGSAVGGGVNLQLK EEEECCCCEEECCEECCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCCEEEEEE RADDKPLTRVTVDGATSGSLGTHVDIGRRFGSEGQFGVRVNQSISGGDTAVDDERRRSNV ECCCCCCEEEEECCCCCCCCCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHCCC TAVSLDWRGDKLRLSGDFLYQRQRIDNGRPVVLVSGDQLPAVPSATHNYAQPWSFSELED EEEEEECCCCEEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH TVGIVRAEYDFLPAWTAYVSAGARHTNEHGDYYTPTYSSSGTTGSRLSVPHKEDAQSAEA HHHEEEECCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCEECCCCCHHHHHHHC GVRGRFTTGPVSHFVTAGASFIRIDSQSAYTMSNAFPTTLYDPAPIASPPTAYTGGDMND CCCCCCCCCCHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC PGTVTKTWLRSLAVSDTLGFLDDRVLFTIGARRQSISVDNFSYTGAVTGVYSDAITTPVL CCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCEECCEEEHHHHHHHHHHHH GLVVKPWRNVSIFANRSEALAQGEIAPNTARNAGQALSPYRSKQYEAGIRYDTDKYGASL HHHCCCCCCEEEEECCCHHHHCCCCCCCCHHCCCCCCCCHHHHHHCCCCCCCCHHHCCEE ALFQIEKPMAYTDPATNLFGADGTQRHRGIETAVYGEPWKGVRLIAGATYLNATLQNTAG EEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCEEEEECCHHHHHHHHCCCC GANDGHRPIGVPSFLLNAGAEYDVPMLRGLTLTARWLHTGPQYLDVANTMSIQAWDRFDL CCCCCCCCCCCHHHHHHCCCCCCCHHHCCCEEEEHHHHCCCCCEECCCCEEEEECCCCCC GARYATNVFGKKTTLRATVRNVANKSYWSSTIGGYLTQGDPRSVWLSMTTDF CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]