| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is cls [H]
Identifier: 116690055
GI number: 116690055
Start: 2257102
End: 2258541
Strand: Direct
Name: cls [H]
Synonym: Bcen2424_2034
Alternate gene names: 116690055
Gene position: 2257102-2258541 (Clockwise)
Preceding gene: 116690054
Following gene: 116690057
Centisome position: 64.79
GC content: 66.67
Gene sequence:
>1440_bases ATGACCCTCGACTGGCTACATCTCGGCACCCTGATCCTGACCATCCATGTGCTCGGGATCGTCGCGGCGTGCCACGCAAT CATGAACACGCGCACGTCGCAAGGCGCGATCGCGTGGGCCGTCTCGCTCACGGCCATGCCGTACCTGACGCTCGTTCCAT ACCTGTTCCTCGGCCGTAGCAAATTCTCCGGCTACGTCGACGCCCGGCGCCACGAGCTGGAAATGTTGCGCACACACACA CCGCGTGCGCCGTGGCGCGCGACCGATGCGACCGACGGGCCGGCCGCCGACGCGCTGGGGCAGGCTGCCGTGCTCGCGCT CACGCGGCTCGGCGGCATGCCGTTCCTCGGCGGCAATTCGGTACGCACGCTGGTCAACGGCGACGCGACATTCTCCGCCA TCCTGTCGGCGATCGACGACGCGCGCGACTACGTGCTCGTCCAGTTCTTCATCGTGCGCGACGATGCGCTCGGCCGGATG CTGCGCGACGCGCTGCTCGCGCGCGCGGCCGCCGGCGTACGCTGCTGCCTACTGTACGACAGCATCGGCAGCTTCGACCT GCCGCACAGCTACGTCGACGCATTGCGCCGCGGTGGCGTCGAGGTCCATCCGTTCGCGACCAACCGGAAATTCGTCAATC GCTTCCAGTTGAACTTCCGCAACCATCGCAAGATCGTCGTCGTCGACGGCAATCGCGCGTTCGTCGGCGGCCACAACGTC GGTGTCGAATATCTCGGCGCGAAGCCGCGCCTGTCGCCATGGCGCGACACCCACATCGAGATCCGCGGCCCCGTGGTGGC GAGCATCCAGTACGTGTTCGCCGAAGACTGGCACTGGGCGACGCAGAAACTGCCGCCCATCGCGCTGCCGCCGCCCGCGC AGCCCGGCGACGGCATGCATTGCCTCGCGGTGCCGATGGGGCCGGCCGACAAGCAGGAAACCGGCTCGCTGTTCTTCGTC GAATCGATCAATGCCGCCCGCGAGCGGGTCTGGATCACCACGCCGTACCTCGTTCCCGACGAAGCCGTGGTCTCCGCGCT AAAACTCGCCGTGATGCGCGGCGTCGACGTACGCATCCTGATCCCGAGCCGGCGCGATCACTACGTCGTGTTCGAGGCGT CCAAGCTTTATGCGCGCGACCTCGTCGATGCGGGCGTGAAAGTGTTCCGCTACCGGCCCGGCTTCCTGCACCAGAAGGTC GTGCTGATCGACCGCATCGCGGCGGCGGTCGGCAGCGCGAATCTCGATAACCGTTCGTTCCGCCTCAATTTCGAGGTCAT GGTCATGACCGTCGATCGCGCGTTCGCCGGCGAAGTCGAGACGATGCTCGATGCCGACTTCGCGCAGGCGTACGAGGTCG ATGCGGACGAATACCGGCAGTCGCCTGCCTGGCGGCGCATCGCGATGCACGTCGCGCGGTTGTTCGCGCCGATCCTGTAA
Upstream 100 bases:
>100_bases CGTTGCGCCGCACGGTTGGGTAAGATGCGCGTAGGCGGCCGCCCGGCCGCACGACTTCGGGAGTCCCACCGGGTGTCCCG CAGGAGTCCTTTAAGCGCCC
Downstream 100 bases:
>100_bases CGGCGGCGCACGCACGATCCGCACCGGCGCGGCGCACGCCGCGCATCGCCGTCACAGCAGCTTGTCGATGTCCGCTGCGA TTTCATCGGGCTTGGTGGAC
Product: cardiolipin synthetase
Products: Biphosphatidylglycerol; Glycerol. [C]
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MTLDWLHLGTLILTIHVLGIVAACHAIMNTRTSQGAIAWAVSLTAMPYLTLVPYLFLGRSKFSGYVDARRHELEMLRTHT PRAPWRATDATDGPAADALGQAAVLALTRLGGMPFLGGNSVRTLVNGDATFSAILSAIDDARDYVLVQFFIVRDDALGRM LRDALLARAAAGVRCCLLYDSIGSFDLPHSYVDALRRGGVEVHPFATNRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV GVEYLGAKPRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQKLPPIALPPPAQPGDGMHCLAVPMGPADKQETGSLFFV ESINAARERVWITTPYLVPDEAVVSALKLAVMRGVDVRILIPSRRDHYVVFEASKLYARDLVDAGVKVFRYRPGFLHQKV VLIDRIAAAVGSANLDNRSFRLNFEVMVMTVDRAFAGEVETMLDADFAQAYEVDADEYRQSPAWRRIAMHVARLFAPIL
Sequences:
>Translated_479_residues MTLDWLHLGTLILTIHVLGIVAACHAIMNTRTSQGAIAWAVSLTAMPYLTLVPYLFLGRSKFSGYVDARRHELEMLRTHT PRAPWRATDATDGPAADALGQAAVLALTRLGGMPFLGGNSVRTLVNGDATFSAILSAIDDARDYVLVQFFIVRDDALGRM LRDALLARAAAGVRCCLLYDSIGSFDLPHSYVDALRRGGVEVHPFATNRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV GVEYLGAKPRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQKLPPIALPPPAQPGDGMHCLAVPMGPADKQETGSLFFV ESINAARERVWITTPYLVPDEAVVSALKLAVMRGVDVRILIPSRRDHYVVFEASKLYARDLVDAGVKVFRYRPGFLHQKV VLIDRIAAAVGSANLDNRSFRLNFEVMVMTVDRAFAGEVETMLDADFAQAYEVDADEYRQSPAWRRIAMHVARLFAPIL >Mature_478_residues TLDWLHLGTLILTIHVLGIVAACHAIMNTRTSQGAIAWAVSLTAMPYLTLVPYLFLGRSKFSGYVDARRHELEMLRTHTP RAPWRATDATDGPAADALGQAAVLALTRLGGMPFLGGNSVRTLVNGDATFSAILSAIDDARDYVLVQFFIVRDDALGRML RDALLARAAAGVRCCLLYDSIGSFDLPHSYVDALRRGGVEVHPFATNRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNVG VEYLGAKPRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQKLPPIALPPPAQPGDGMHCLAVPMGPADKQETGSLFFVE SINAARERVWITTPYLVPDEAVVSALKLAVMRGVDVRILIPSRRDHYVVFEASKLYARDLVDAGVKVFRYRPGFLHQKVV LIDRIAAAVGSANLDNRSFRLNFEVMVMTVDRAFAGEVETMLDADFAQAYEVDADEYRQSPAWRRIAMHVARLFAPIL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=473, Percent_Identity=27.906976744186, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1787007, Length=342, Percent_Identity=31.8713450292398, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 53113; Mature: 52982
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDWLHLGTLILTIHVLGIVAACHAIMNTRTSQGAIAWAVSLTAMPYLTLVPYLFLGRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC KFSGYVDARRHELEMLRTHTPRAPWRATDATDGPAADALGQAAVLALTRLGGMPFLGGNS CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC VRTLVNGDATFSAILSAIDDARDYVLVQFFIVRDDALGRMLRDALLARAAAGVRCCLLYD EEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEE SIGSFDLPHSYVDALRRGGVEVHPFATNRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV CCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHEECCCCCCEEEEEECCEEEECCCCC GVEYLGAKPRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQKLPPIALPPPAQPGDGMH CEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCE CLAVPMGPADKQETGSLFFVESINAARERVWITTPYLVPDEAVVSALKLAVMRGVDVRIL EEEECCCCCCCCCCCCEEEEECCCCCHHEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE IPSRRDHYVVFEASKLYARDLVDAGVKVFRYRPGFLHQKVVLIDRIAAAVGSANLDNRSF ECCCCCCEEEEECHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEE RLNFEVMVMTVDRAFAGEVETMLDADFAQAYEVDADEYRQSPAWRRIAMHVARLFAPIL EEEEEEEEEEECCHHHCCHHHHHCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLDWLHLGTLILTIHVLGIVAACHAIMNTRTSQGAIAWAVSLTAMPYLTLVPYLFLGRS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC KFSGYVDARRHELEMLRTHTPRAPWRATDATDGPAADALGQAAVLALTRLGGMPFLGGNS CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC VRTLVNGDATFSAILSAIDDARDYVLVQFFIVRDDALGRMLRDALLARAAAGVRCCLLYD EEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEE SIGSFDLPHSYVDALRRGGVEVHPFATNRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV CCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHEECCCCCCEEEEEECCEEEECCCCC GVEYLGAKPRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQKLPPIALPPPAQPGDGMH CEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCE CLAVPMGPADKQETGSLFFVESINAARERVWITTPYLVPDEAVVSALKLAVMRGVDVRIL EEEECCCCCCCCCCCCEEEEECCCCCHHEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE IPSRRDHYVVFEASKLYARDLVDAGVKVFRYRPGFLHQKVVLIDRIAAAVGSANLDNRSF ECCCCCCEEEEECHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEE RLNFEVMVMTVDRAFAGEVETMLDADFAQAYEVDADEYRQSPAWRRIAMHVARLFAPIL EEEEEEEEEEECCHHHCCHHHHHCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Phosphatidylglycerol [C]
Specific reaction: 2 Phosphatidylglycerol = Biphosphatidylglycerol + Glycerol. [C]
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA