Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is yfcB [C]

Identifier: 116690054

GI number: 116690054

Start: 2256062

End: 2256970

Strand: Direct

Name: yfcB [C]

Synonym: Bcen2424_2033

Alternate gene names: 116690054

Gene position: 2256062-2256970 (Clockwise)

Preceding gene: 116690053

Following gene: 116690055

Centisome position: 64.76

GC content: 68.43

Gene sequence:

>909_bases
ATGACGACACCTTTTGCCACAGTCCGCGACCTGCTGCGCTACGCGGTCACGCGCTTCTCGAAAGCGAAGCTCGCGTTCGG
TCACGGTTCCGACAACGCGTACGACGAAGCGGCCTACCTCGTGCTGCACACGCTCGACCTGCCGCTCGACACGCTCGAGC
CGTTCATGGACGCGCGCCTCTTGCCCGACGAAATCGCGGCCGTGCTCGCGGTGATCGAACGACGCGCGGCCGACCGCGTG
CCGGCCGCGTACCTCACGCACGAAGCATGGATGCACGGCCACCGCTTCTACGTCGACGAACGCGTGATCGTGCCGCGCTC
GTTCATCGGCGAACTACTCGACGACGGGCTGCAGCCGTATGTCGCCGATCCCGAGCAGGTCGGCGCGGTGCTCGAACTGT
GCACCGGCTCCGGCTGCCTCGCGATCCTCGCGGCAAGCGCGTTCCCGAACGCCGAGATCGACGCGGTCGACCTGTCGGAC
AAGGCGCTCGAAGTCGCGGAAATCAACGTGCGCGACTACGGCCTCGAAGACCGCATCGGGCTGCACCGCGGCGACCTCTA
CGCACCGCTGCCCGCGTTCCGCACCGATCCCGACTCGCGCTACGACGTGATCCTGACGAACCCGCCGTACGTGAACGCGG
CGTCGATGGCCGCGCTGCCGCCCGAATACCGGCACGAGCCGGAGATGGCGCTCGCCGGCGGCGACGACGGGATGGACATC
GTGCGACGCATCGTCGCCGAAGCGCACCGCTGGCTGCATGACGACGGCGTGCTCGTCGTCGAGATCGGCAACGAGCGCGA
GCACGTCGAAGCGGCATTCGGCGGCCTCGAGCTCACGTGGCTGCCCACCAGCGCGGGCGATGACGCCGTATTCCTGATCC
AGGCGTCGGACCTGCCCCGCAAGGGCTGA

Upstream 100 bases:

>100_bases
TCCACAAGATCGACGAGCACATCGAAGTGCGCTTCGTCGACCCGCTGAAGAACGTGTACCGACGCGCGCTCGAACAACTG
ATCGCCTGACGGAGCCTCGC

Downstream 100 bases:

>100_bases
GCGTTGCCGGCCCACCCGCCGTGCGGCGCCCCGTTGCGCCGCACGGTTGGGTAAGATGCGCGTAGGCGGCCGCCCGGCCG
CACGACTTCGGGAGTCCCAC

Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRV
PAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSD
KALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI
VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPRKG

Sequences:

>Translated_302_residues
MTTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRV
PAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSD
KALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI
VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPRKG
>Mature_301_residues
TTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRVP
AAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSDK
ALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDIV
RRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPRKG

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705409, Length=241, Percent_Identity=29.045643153527, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI87082085, Length=294, Percent_Identity=47.2789115646259, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1787463, Length=247, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24582226, Length=236, Percent_Identity=27.9661016949153, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR017127
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 33157; Mature: 33026

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARL
CCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEEECCCCHHHHHHHHHCCC
LPDEIAAVLAVIERRAADRVPAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCEEECCHHHHHHHHHCCCCCC
VADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG
CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCCC
LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCHHHCCCCCEEEECCCCCHHH
VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPR
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCC
KG
CC
>Mature Secondary Structure 
TTPFATVRDLLRYAVTRFSKAKLAFGHGSDNAYDEAAYLVLHTLDLPLDTLEPFMDARL
CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEEECCCCHHHHHHHHHCCC
LPDEIAAVLAVIERRAADRVPAAYLTHEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCEEECCHHHHHHHHHCCCCCC
VADPEQVGAVLELCTGSGCLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG
CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEHHHCCCCCCCC
LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYRHEPEMALAGGDDGMDI
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCHHHCCCCCEEEECCCCCHHH
VRRIVAEAHRWLHDDGVLVVEIGNEREHVEAAFGGLELTWLPTSAGDDAVFLIQASDLPR
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCC
KG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]