| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is allA [H]
Identifier: 116689981
GI number: 116689981
Start: 2179129
End: 2179641
Strand: Reverse
Name: allA [H]
Synonym: Bcen2424_1960
Alternate gene names: 116689981
Gene position: 2179641-2179129 (Counterclockwise)
Preceding gene: 116689982
Following gene: 116689980
Centisome position: 62.56
GC content: 64.13
Gene sequence:
>513_bases ATGAAGACGCTTGCCATCGAACCGCTGACCAGGGAAGCCTTCGCGCCGTTCGGCGACGTGATCGAAACGGCAGGGGCGAA GCAGATCCCGATCAACCTCGGCACGACGATCCGCTTTCACGATCTCGCGAAAGTAGACGTGACCGATGAAGGCGGCCGCA CGCTCGTCAACCTGTTCCGCGGCCAGCCGCGCACGCTGCCGTTCGAAGTGAAGATGCTGGAACGGCATCCGCTCGGCAGC CAGGCGTTCGTGCCGCTGAACGACCAGCCGTATCTCGTCGTCGTCGCGCCCGCGGGCGATCTCGATCCGGCGAAGATTCG TGCATTCGTGACGAGCGGCTGGCAGGGCGTCAATTACGCGAAGGGCGTGTGGCATCACCCGCTGATCGCGTTGGGCGGCG TCAGCGATTTCATCGTCGTCGATCGCGGCGGTGACGGGCTGAACCTGAACGAGCAGGATCTGCAGGAGTCGCTGTGGCTC ACCGAGGATGCACTGGATGCGGTGACGGCCTGA
Upstream 100 bases:
>100_bases AACACGACATCGCGTCGCTCGGCCCCGTCACGCACGTGCGACTGAACATCATTCCGGACGGCGGCGTGTCGCGCCTGCGC TTGTGGGGGACGCTCGACAA
Downstream 100 bases:
>100_bases GTCGGGCTGATCTGATCGTCCGCCTGTCCAAACCCGCGCAACCTGCGCGGGTTTTTTTATGCGCGTCGTTTTCTTGCGAA TCAGTTTGACGTGGCCTTGC
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKTLAIEPLTREAFAPFGDVIETAGAKQIPINLGTTIRFHDLAKVDVTDEGGRTLVNLFRGQPRTLPFEVKMLERHPLGS QAFVPLNDQPYLVVVAPAGDLDPAKIRAFVTSGWQGVNYAKGVWHHPLIALGGVSDFIVVDRGGDGLNLNEQDLQESLWL TEDALDAVTA
Sequences:
>Translated_170_residues MKTLAIEPLTREAFAPFGDVIETAGAKQIPINLGTTIRFHDLAKVDVTDEGGRTLVNLFRGQPRTLPFEVKMLERHPLGS QAFVPLNDQPYLVVVAPAGDLDPAKIRAFVTSGWQGVNYAKGVWHHPLIALGGVSDFIVVDRGGDGLNLNEQDLQESLWL TEDALDAVTA >Mature_170_residues MKTLAIEPLTREAFAPFGDVIETAGAKQIPINLGTTIRFHDLAKVDVTDEGGRTLVNLFRGQPRTLPFEVKMLERHPLGS QAFVPLNDQPYLVVVAPAGDLDPAKIRAFVTSGWQGVNYAKGVWHHPLIALGGVSDFIVVDRGGDGLNLNEQDLQESLWL TEDALDAVTA
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=142, Percent_Identity=48.5915492957746, Blast_Score=140, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322223, Length=157, Percent_Identity=31.8471337579618, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 18483; Mature: 18483
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLAIEPLTREAFAPFGDVIETAGAKQIPINLGTTIRFHDLAKVDVTDEGGRTLVNLFR CCCEECCCCCHHHCCCHHHHHHHCCCEEEEEECCCEEEEECEEEEEECCCCCHHHHHHHC GQPRTLPFEVKMLERHPLGSQAFVPLNDQPYLVVVAPAGDLDPAKIRAFVTSGWQGVNYA CCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHEEEEEECCCCCCCCC KGVWHHPLIALGGVSDFIVVDRGGDGLNLNEQDLQESLWLTEDALDAVTA CCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MKTLAIEPLTREAFAPFGDVIETAGAKQIPINLGTTIRFHDLAKVDVTDEGGRTLVNLFR CCCEECCCCCHHHCCCHHHHHHHCCCEEEEEECCCEEEEECEEEEEECCCCCHHHHHHHC GQPRTLPFEVKMLERHPLGSQAFVPLNDQPYLVVVAPAGDLDPAKIRAFVTSGWQGVNYA CCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHEEEEEECCCCCCCCC KGVWHHPLIALGGVSDFIVVDRGGDGLNLNEQDLQESLWLTEDALDAVTA CCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA