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The map label for this gene is alc1 [H]

Identifier: 116689982

GI number: 116689982

Start: 2179638

End: 2180651

Strand: Reverse

Name: alc1 [H]

Synonym: Bcen2424_1961

Alternate gene names: 116689982

Gene position: 2180651-2179638 (Counterclockwise)

Preceding gene: 116689983

Following gene: 116689981

Centisome position: 62.59

GC content: 66.37

Gene sequence:

>1014_bases
ATGGCTGTTCCGCTTCTCGATCCGAACGCACCCGATTTCACGCGGCGCTACGTGAATCTTGCCGACCCGCGTCTCGGTGC
GCAGGCGCTCGAGGCCAGCGACGATTTCTTCGCGCCGAAGGACCGGATGCTGAACCCCGAGCCGGCCGTCTTCATCCCCG
GCAAGTACGACGACCACGGCAAGTGGATGGACGGCTGGGAAACGCGCCGCAAGCGCACGACCGGCTACGACTGGTGCATC
GTCAAGCTCGCGCGCCCGGGCGTGATCAAGGGCTTCGACATCGACACGAGCCACTTCACCGGCAACTTCCCGCCGGCGGC
CTCGATCGAGGCCGCGTTCGTGGCTGACGGCGCGCCGACGCAGGCGACCGAGTGGGTCGAGATCGTGCCGTCGACGACGC
TGCAGGGCAACAGCCATCACTACGTCGAAGCGAACGATGCACGCTCGTTCACGCATCTGCGCGTGAACATCTACCCGGAC
GGCGGCATCGCGCGCCTGCGTGTGTACGGCCAGCCGCAGCTCGACTGGGCCGGCGCGAGCGCGACCGAGCAGTTCGACCT
CGCGGCGATGGAAAACGGCGGTTACGTGGTGGCCGCGAACAACCAGCACTTCGGCGTCGCGTCGAACCTGCTGCTGCCGG
GCCGCGGCGTGAACATGGGCGACGGCTGGGAAACGCGCCGCCGCCGCGAACCGGGCAACGACTGGGCGATCATCGCGCTC
GCGCAACCGGGCGTGATCCGCAAGATCGAAGTCGATACCGCGTTCTTCAAGGGCAATTACCCGGATCGGTGCTCGATCCA
GGCCGCCTATGTGTCGGGCGGCACCGACAGCTCGTTGATCACGCAGTCGATGTTCTGGCCGGTGCTGCTCGGCGAACAGA
AGCTGCAGATGGACAAGCAGCACTACTTCGAACACGACATCGCGTCGCTCGGCCCCGTCACGCACGTGCGACTGAACATC
ATTCCGGACGGCGGCGTGTCGCGCCTGCGCTTGTGGGGGACGCTCGACAAATGA

Upstream 100 bases:

>100_bases
CCTCGACGACCTGATCGACGCCTGACACCGCCGCCTGACACCACAATACGGCCCGCTGCGTCGCGGCGGCCCGATCGTCT
CACTGAAACAAGGAAACATC

Downstream 100 bases:

>100_bases
AGACGCTTGCCATCGAACCGCTGACCAGGGAAGCCTTCGCGCCGTTCGGCGACGTGATCGAAACGGCAGGGGCGAAGCAG
ATCCCGATCAACCTCGGCAC

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 1 [H]

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MAVPLLDPNAPDFTRRYVNLADPRLGAQALEASDDFFAPKDRMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCI
VKLARPGVIKGFDIDTSHFTGNFPPAASIEAAFVADGAPTQATEWVEIVPSTTLQGNSHHYVEANDARSFTHLRVNIYPD
GGIARLRVYGQPQLDWAGASATEQFDLAAMENGGYVVAANNQHFGVASNLLLPGRGVNMGDGWETRRRREPGNDWAIIAL
AQPGVIRKIEVDTAFFKGNYPDRCSIQAAYVSGGTDSSLITQSMFWPVLLGEQKLQMDKQHYFEHDIASLGPVTHVRLNI
IPDGGVSRLRLWGTLDK

Sequences:

>Translated_337_residues
MAVPLLDPNAPDFTRRYVNLADPRLGAQALEASDDFFAPKDRMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCI
VKLARPGVIKGFDIDTSHFTGNFPPAASIEAAFVADGAPTQATEWVEIVPSTTLQGNSHHYVEANDARSFTHLRVNIYPD
GGIARLRVYGQPQLDWAGASATEQFDLAAMENGGYVVAANNQHFGVASNLLLPGRGVNMGDGWETRRRREPGNDWAIIAL
AQPGVIRKIEVDTAFFKGNYPDRCSIQAAYVSGGTDSSLITQSMFWPVLLGEQKLQMDKQHYFEHDIASLGPVTHVRLNI
IPDGGVSRLRLWGTLDK
>Mature_336_residues
AVPLLDPNAPDFTRRYVNLADPRLGAQALEASDDFFAPKDRMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCIV
KLARPGVIKGFDIDTSHFTGNFPPAASIEAAFVADGAPTQATEWVEIVPSTTLQGNSHHYVEANDARSFTHLRVNIYPDG
GIARLRVYGQPQLDWAGASATEQFDLAAMENGGYVVAANNQHFGVASNLLLPGRGVNMGDGWETRRRREPGNDWAIIALA
QPGVIRKIEVDTAFFKGNYPDRCSIQAAYVSGGTDSSLITQSMFWPVLLGEQKLQMDKQHYFEHDIASLGPVTHVRLNII
PDGGVSRLRLWGTLDK

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=365, Percent_Identity=38.6301369863014, Blast_Score=261, Evalue=5e-70,
Organism=Saccharomyces cerevisiae, GI6322220, Length=331, Percent_Identity=40.1812688821752, Blast_Score=227, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 37297; Mature: 37166

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPLLDPNAPDFTRRYVNLADPRLGAQALEASDDFFAPKDRMLNPEPAVFIPGKYDDHG
CCCCCCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGYDWCIVKLARPGVIKGFDIDTSHFTGNFPPAASIEAAFVADGAPT
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
QATEWVEIVPSTTLQGNSHHYVEANDARSFTHLRVNIYPDGGIARLRVYGQPQLDWAGAS
CCCCEEEEECCCEECCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCC
ATEQFDLAAMENGGYVVAANNQHFGVASNLLLPGRGVNMGDGWETRRRREPGNDWAIIAL
CCCCEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIRKIEVDTAFFKGNYPDRCSIQAAYVSGGTDSSLITQSMFWPVLLGEQKLQMDKQ
ECCCEEEEEEECEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHEEECCHHHHHHHH
HYFEHDIASLGPVTHVRLNIIPDGGVSRLRLWGTLDK
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
AVPLLDPNAPDFTRRYVNLADPRLGAQALEASDDFFAPKDRMLNPEPAVFIPGKYDDHG
CCCCCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGYDWCIVKLARPGVIKGFDIDTSHFTGNFPPAASIEAAFVADGAPT
CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
QATEWVEIVPSTTLQGNSHHYVEANDARSFTHLRVNIYPDGGIARLRVYGQPQLDWAGAS
CCCCEEEEECCCEECCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCC
ATEQFDLAAMENGGYVVAANNQHFGVASNLLLPGRGVNMGDGWETRRRREPGNDWAIIAL
CCCCEEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEEE
AQPGVIRKIEVDTAFFKGNYPDRCSIQAAYVSGGTDSSLITQSMFWPVLLGEQKLQMDKQ
ECCCEEEEEEECEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHEEECCHHHHHHHH
HYFEHDIASLGPVTHVRLNIIPDGGVSRLRLWGTLDK
HHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA