| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689910
Identifier: 116689910
GI number: 116689910
Start: 2094693
End: 2095049
Strand: Reverse
Name: 116689910
Synonym: Bcen2424_1889
Alternate gene names: NA
Gene position: 2095049-2094693 (Counterclockwise)
Preceding gene: 116689911
Following gene: 116689909
Centisome position: 60.14
GC content: 66.39
Gene sequence:
>357_bases ATGTTGCGCGCAATGTTTTGTGCCGCGGCGTTTGCCGTGCCATTGTCGGCGGCGGCTTTCACGGGCGCGGATCTCGACCG GCTGTGCGCGAAGACGGACGTCAAGTCGCGGGCGTCGTGCGCGGCCTATATCGAAGGCGCCGCCGACGGCGTCTACAACA CGATCGATGCGATCGGCGGCACCACGGGGCCGCGCGTCGGCCAGTACTTCTGCCTGCCGCCCGACATCCGGGCGCAACAG ATGACGGACGCGGTGCGCAAGTACATCGCCGAGAATCCAAAGCTGGCCGACTACAACGCGAGCACCGCGGTGTCGCTCGG TCTCGGCAAGGCGTTTCCCTGCAGGAACGGCAACTGA
Upstream 100 bases:
>100_bases CTGTCCGCCGGGCCGGCTTCCGGCCGGCGCCGGGCATCCGGCGCCGCACCAGCCAGGGCAGCAGGCGGTCTCGGGCCGCA TTGACATAAGAAGGAACACC
Downstream 100 bases:
>100_bases TCTGACGCCGTGTCCGGGCGCGTGCATGGCCCGGACGTCGCCGACGCATCCAGGACGAAGCCTGTGCGCTTCATCACTCG AGGGCGCCGATGATTTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLRAMFCAAAFAVPLSAAAFTGADLDRLCAKTDVKSRASCAAYIEGAADGVYNTIDAIGGTTGPRVGQYFCLPPDIRAQQ MTDAVRKYIAENPKLADYNASTAVSLGLGKAFPCRNGN
Sequences:
>Translated_118_residues MLRAMFCAAAFAVPLSAAAFTGADLDRLCAKTDVKSRASCAAYIEGAADGVYNTIDAIGGTTGPRVGQYFCLPPDIRAQQ MTDAVRKYIAENPKLADYNASTAVSLGLGKAFPCRNGN >Mature_118_residues MLRAMFCAAAFAVPLSAAAFTGADLDRLCAKTDVKSRASCAAYIEGAADGVYNTIDAIGGTTGPRVGQYFCLPPDIRAQQ MTDAVRKYIAENPKLADYNASTAVSLGLGKAFPCRNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12344; Mature: 12344
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRAMFCAAAFAVPLSAAAFTGADLDRLCAKTDVKSRASCAAYIEGAADGVYNTIDAIGG CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCC TTGPRVGQYFCLPPDIRAQQMTDAVRKYIAENPKLADYNASTAVSLGLGKAFPCRNGN CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MLRAMFCAAAFAVPLSAAAFTGADLDRLCAKTDVKSRASCAAYIEGAADGVYNTIDAIGG CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCC TTGPRVGQYFCLPPDIRAQQMTDAVRKYIAENPKLADYNASTAVSLGLGKAFPCRNGN CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA