Click here to switch to the map view.

The map label for this gene is yjeP [C]

Identifier: 116689909

GI number: 116689909

Start: 2093431

End: 2094603

Strand: Reverse

Name: yjeP [C]

Synonym: Bcen2424_1888

Alternate gene names: 116689909

Gene position: 2094603-2093431 (Counterclockwise)

Preceding gene: 116689910

Following gene: 116689908

Centisome position: 60.12

GC content: 68.54

Gene sequence:

>1173_bases
ATGATTTCAATCGAGGAACTGCAGCGCATCGCCGATGCGCCGTTGCATTCGTGGCTCGGCACGCTGGGCGTGTCGGTCAT
CGTCATACTGGTCGTCACGGTCGTGCACCGCCTCGGCGCACGTATCGTCAAGCGCATCGCGCAGCCGTATCCGCTGATGA
GCGCGATCCTGCGCTACATCGACAAGCCGTCGCTCGTCGTGCTGGCGCTGCTGGCGCTCGAATTCGTGTGGGTCCAGGCG
GACGACGGCATGTCGTTCGTGCGCGGCATGCGCACCGCGGCCGCGGTCGGCTCGATCGTGTCGCTCACGTGGCTGCTGGT
ACGGCTCGCGGCCGGCGTCGGCGACGCGATCATCCAGGCCCATCCGATCGACACGGCCGACAACCTTCAGGCACGGCGTG
TCCATACACAGGCCAAGGTGCTCGTGCGGACCGTGATGGTGCTGATCGTGATCATCGGCACCGGCGCCGCGCTGATGACG
TTCCCCAACGTGCGCCAGGTCGGCGCGAGCCTGCTGGCATCGGCCGGTGTGGCAGGGCTGGTCGCCGGTATCGCCGCGCG
GCCGGTGCTCGGCAACCTGATCGCCGGGTTGCAGATCGCGCTCACGCAACCGATTCGGCTCGACGACGTGGTCGTGATCC
AGGGCGAGTGGGGGCGCATCGAGGAAATCACCGGCTCGTTCGTGTCGGTGCGGCTGTGGGACCAGCGGCGCCTCGTCGTG
CCGCTGCAGTGGATCATCGAGAACCCGTTCACGAACTGGACGCGCAGCAGCGCGGAGATCATCGGCACCGTCTACCTGTC
GGTCGACTACCGCACGCCGCTTGCGCCGCTGCGCGAGGAACTCGCGCGGCTCGTCCACGCCGCGCCCGAGTGGGACGGTC
GCGTGCAGGTGCTGCAGGTGACCGATGCGACGGAGCGCACGATGCAGTTGCGCGCGCTCGTCAGCGCGGCCGATTCGTCG
TCGTGCTGGGATCTGCGCTGCCGCGTGCGCGAAGGGTTGATCGCGTATCTGCAGCACCGCTATCCGCAATGCCTGCCGCG
CAGCCGGATGGAACTGTATCCGCACGAATCCGCGCCGGACGCACCGAATCCCGAAAGGCCGCACGCGCGATCGCCCGCCG
CCAGCACGGCGGCCAACACCGCAGCCGACCCGCAGGCCGTCGACGGCCGCTGA

Upstream 100 bases:

>100_bases
ACGGCAACTGATCTGACGCCGTGTCCGGGCGCGTGCATGGCCCGGACGTCGCCGACGCATCCAGGACGAAGCCTGTGCGC
TTCATCACTCGAGGGCGCCG

Downstream 100 bases:

>100_bases
ACGCGGCCCGAGTCCTGCGGCCATTCCCTGTTTCCCATTGTCATGACCGCGCTGAAGACGCTCGCCATCGCCAATTACCG
CTCGCTGCGCGAGCTGATCG

Product: MscS mechanosensitive ion channel

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel MscS; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Domain-Containing Protein; Mechanosensitive Ion Channel Protein; MscS Mechanosensitive Ion Channel Protein; Transporter MscS Family; MscS Family Transporter; Small-Conductance Mechanosensitive Channel-Like Protein; Mechanosensitive Channel Protein

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MISIEELQRIADAPLHSWLGTLGVSVIVILVVTVVHRLGARIVKRIAQPYPLMSAILRYIDKPSLVVLALLALEFVWVQA
DDGMSFVRGMRTAAAVGSIVSLTWLLVRLAAGVGDAIIQAHPIDTADNLQARRVHTQAKVLVRTVMVLIVIIGTGAALMT
FPNVRQVGASLLASAGVAGLVAGIAARPVLGNLIAGLQIALTQPIRLDDVVVIQGEWGRIEEITGSFVSVRLWDQRRLVV
PLQWIIENPFTNWTRSSAEIIGTVYLSVDYRTPLAPLREELARLVHAAPEWDGRVQVLQVTDATERTMQLRALVSAADSS
SCWDLRCRVREGLIAYLQHRYPQCLPRSRMELYPHESAPDAPNPERPHARSPAASTAANTAADPQAVDGR

Sequences:

>Translated_390_residues
MISIEELQRIADAPLHSWLGTLGVSVIVILVVTVVHRLGARIVKRIAQPYPLMSAILRYIDKPSLVVLALLALEFVWVQA
DDGMSFVRGMRTAAAVGSIVSLTWLLVRLAAGVGDAIIQAHPIDTADNLQARRVHTQAKVLVRTVMVLIVIIGTGAALMT
FPNVRQVGASLLASAGVAGLVAGIAARPVLGNLIAGLQIALTQPIRLDDVVVIQGEWGRIEEITGSFVSVRLWDQRRLVV
PLQWIIENPFTNWTRSSAEIIGTVYLSVDYRTPLAPLREELARLVHAAPEWDGRVQVLQVTDATERTMQLRALVSAADSS
SCWDLRCRVREGLIAYLQHRYPQCLPRSRMELYPHESAPDAPNPERPHARSPAASTAANTAADPQAVDGR
>Mature_390_residues
MISIEELQRIADAPLHSWLGTLGVSVIVILVVTVVHRLGARIVKRIAQPYPLMSAILRYIDKPSLVVLALLALEFVWVQA
DDGMSFVRGMRTAAAVGSIVSLTWLLVRLAAGVGDAIIQAHPIDTADNLQARRVHTQAKVLVRTVMVLIVIIGTGAALMT
FPNVRQVGASLLASAGVAGLVAGIAARPVLGNLIAGLQIALTQPIRLDDVVVIQGEWGRIEEITGSFVSVRLWDQRRLVV
PLQWIIENPFTNWTRSSAEIIGTVYLSVDYRTPLAPLREELARLVHAAPEWDGRVQVLQVTDATERTMQLRALVSAADSS
SCWDLRCRVREGLIAYLQHRYPQCLPRSRMELYPHESAPDAPNPERPHARSPAASTAANTAADPQAVDGR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42545; Mature: 42545

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIEELQRIADAPLHSWLGTLGVSVIVILVVTVVHRLGARIVKRIAQPYPLMSAILRYI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DKPSLVVLALLALEFVWVQADDGMSFVRGMRTAAAVGSIVSLTWLLVRLAAGVGDAIIQA
CCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE
HPIDTADNLQARRVHTQAKVLVRTVMVLIVIIGTGAALMTFPNVRQVGASLLASAGVAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCHHHH
VAGIAARPVLGNLIAGLQIALTQPIRLDDVVVIQGEWGRIEEITGSFVSVRLWDQRRLVV
HHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCHHHHCCCEEEEEEECCCCEEE
PLQWIIENPFTNWTRSSAEIIGTVYLSVDYRTPLAPLREELARLVHAAPEWDGRVQVLQV
EHHHHHCCCCCCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
TDATERTMQLRALVSAADSSSCWDLRCRVREGLIAYLQHRYPQCLPRSRMELYPHESAPD
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCC
APNPERPHARSPAASTAANTAADPQAVDGR
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MISIEELQRIADAPLHSWLGTLGVSVIVILVVTVVHRLGARIVKRIAQPYPLMSAILRYI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
DKPSLVVLALLALEFVWVQADDGMSFVRGMRTAAAVGSIVSLTWLLVRLAAGVGDAIIQA
CCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE
HPIDTADNLQARRVHTQAKVLVRTVMVLIVIIGTGAALMTFPNVRQVGASLLASAGVAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCHHHH
VAGIAARPVLGNLIAGLQIALTQPIRLDDVVVIQGEWGRIEEITGSFVSVRLWDQRRLVV
HHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCHHHHCCCEEEEEEECCCCEEE
PLQWIIENPFTNWTRSSAEIIGTVYLSVDYRTPLAPLREELARLVHAAPEWDGRVQVLQV
EHHHHHCCCCCCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
TDATERTMQLRALVSAADSSSCWDLRCRVREGLIAYLQHRYPQCLPRSRMELYPHESAPD
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCC
APNPERPHARSPAASTAANTAADPQAVDGR
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA