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The map label for this gene is fabD [H]

Identifier: 116689297

GI number: 116689297

Start: 1405212

End: 1406144

Strand: Direct

Name: fabD [H]

Synonym: Bcen2424_1275

Alternate gene names: 116689297

Gene position: 1405212-1406144 (Clockwise)

Preceding gene: 116689296

Following gene: 116689298

Centisome position: 40.33

GC content: 74.81

Gene sequence:

>933_bases
ATGACGCTGGCCATCCTGTGTTCGGGGCAAGGCGCGCAACGCGCCGACATGTTCGATCTGACCGGGTCGGCGCCGCAGGC
CGACGCATTGTTCGCGCATGCGGGCCGGCTGCTCGGCGACGATCCGCGCACCTGGGTCCGGCAGGCCGGGCCCGATGCGC
TGCGGGAAAACCGGGCCGCGCAGATCCTCTGCACGGTCCAGGCGCTCGCGGCGGCCGCGCTGCTCGATGCGGTGTGGCCG
CGCCGGCGCTGCGTCGCCGGCTACAGCGTCGGCGAGGTCGGCTCGTGGAGCGTCGCGGGGATGATCGAACCGCACGACGC
GCTCGACCTGGCCGATGCGCGTGCACGCGCGATGGATGCCGCAAGCGGCGGCGACGAGCGGATGGTGTTCGTGCGCGGCC
TGACGCGTTCGCAACTGGCGCAGCTGTGCGACGGTCGCGACGCGGCCATCGCGATCGCGAACCCGGGCGATGCGTTCGTG
GTCGCGGGGCGGCACGCCGATGTCGATGCGGTGGCCGGCGACGCGACGCATGCCGGCGCGCTGCGCGTCGCGCCCGTCTG
CGTGCGGATCGCGTCGCACACGCGCCGGCTCGCGGCGGCCGTGCCGGCCTTCCGCGCGACGCTGGCCGCGACGCGCGTGC
GCCGGCCGCTGCCCGGCACGCGGCTGTTCTCGGGGATCGACGGCGCGTCGGTGCTCGATGTCGACACGGGCCTCGACAAG
CTCGCGCGGCAGATCGCGGAGCCGGTCGAGTGGGCGAGTTGTCTTGCCGCATGCGTGGAGGCGGGCGCCACCGCGTTTCT
CGAACTCGGTCCCGGGCGCGCGCTGGCCGAGATGGCCGGCGGCGCGTATCCCGCGTTGCCGGCGCGCAGCCTCGCGGATT
TCCGTTCCGTCGACGGCGTGACGAGCTGGCTCGCACGCGTCGCGCCCGGCTGA

Upstream 100 bases:

>100_bases
ATCGGGCGTTCGTCGCACGCCGGCTGAGCCCGGGCGGGGCGGCCGACCTGCTCGCGATGAGCGTGTTCGTCGATGCGCTC
GAAGCCGAAGGGCACGCACG

Downstream 100 bases:

>100_bases
TCGACGGGCTGAAACCCGGCTCGAAACACAGCGTCCGGGCACCGGTTTGGCACTGTGTGTTGCGCCGGCGCAGCAGCGTC
GCAGCCGCCCCTTGCCACGC

Product: putative malonyl CoA-acylcarrier protein transacylase

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTLAILCSGQGAQRADMFDLTGSAPQADALFAHAGRLLGDDPRTWVRQAGPDALRENRAAQILCTVQALAAAALLDAVWP
RRRCVAGYSVGEVGSWSVAGMIEPHDALDLADARARAMDAASGGDERMVFVRGLTRSQLAQLCDGRDAAIAIANPGDAFV
VAGRHADVDAVAGDATHAGALRVAPVCVRIASHTRRLAAAVPAFRATLAATRVRRPLPGTRLFSGIDGASVLDVDTGLDK
LARQIAEPVEWASCLAACVEAGATAFLELGPGRALAEMAGGAYPALPARSLADFRSVDGVTSWLARVAPG

Sequences:

>Translated_310_residues
MTLAILCSGQGAQRADMFDLTGSAPQADALFAHAGRLLGDDPRTWVRQAGPDALRENRAAQILCTVQALAAAALLDAVWP
RRRCVAGYSVGEVGSWSVAGMIEPHDALDLADARARAMDAASGGDERMVFVRGLTRSQLAQLCDGRDAAIAIANPGDAFV
VAGRHADVDAVAGDATHAGALRVAPVCVRIASHTRRLAAAVPAFRATLAATRVRRPLPGTRLFSGIDGASVLDVDTGLDK
LARQIAEPVEWASCLAACVEAGATAFLELGPGRALAEMAGGAYPALPARSLADFRSVDGVTSWLARVAPG
>Mature_309_residues
TLAILCSGQGAQRADMFDLTGSAPQADALFAHAGRLLGDDPRTWVRQAGPDALRENRAAQILCTVQALAAAALLDAVWPR
RRCVAGYSVGEVGSWSVAGMIEPHDALDLADARARAMDAASGGDERMVFVRGLTRSQLAQLCDGRDAAIAIANPGDAFVV
AGRHADVDAVAGDATHAGALRVAPVCVRIASHTRRLAAAVPAFRATLAATRVRRPLPGTRLFSGIDGASVLDVDTGLDKL
ARQIAEPVEWASCLAACVEAGATAFLELGPGRALAEMAGGAYPALPARSLADFRSVDGVTSWLARVAPG

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Homo sapiens, GI51243059, Length=292, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1787334, Length=285, Percent_Identity=28.0701754385965, Blast_Score=78, Evalue=9e-16,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR004410
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 32066; Mature: 31935

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAILCSGQGAQRADMFDLTGSAPQADALFAHAGRLLGDDPRTWVRQAGPDALRENRAA
CEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCHH
QILCTVQALAAAALLDAVWPRRRCVAGYSVGEVGSWSVAGMIEPHDALDLADARARAMDA
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHC
ASGGDERMVFVRGLTRSQLAQLCDGRDAAIAIANPGDAFVVAGRHADVDAVAGDATHAGA
CCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCHHHCCCCCCCCC
LRVAPVCVRIASHTRRLAAAVPAFRATLAATRVRRPLPGTRLFSGIDGASVLDVDTGLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEHHCCHHH
LARQIAEPVEWASCLAACVEAGATAFLELGPGRALAEMAGGAYPALPARSLADFRSVDGV
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TSWLARVAPG
HHHHHHHCCC
>Mature Secondary Structure 
TLAILCSGQGAQRADMFDLTGSAPQADALFAHAGRLLGDDPRTWVRQAGPDALRENRAA
EEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCHH
QILCTVQALAAAALLDAVWPRRRCVAGYSVGEVGSWSVAGMIEPHDALDLADARARAMDA
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHC
ASGGDERMVFVRGLTRSQLAQLCDGRDAAIAIANPGDAFVVAGRHADVDAVAGDATHAGA
CCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCHHHCCCCCCCCC
LRVAPVCVRIASHTRRLAAAVPAFRATLAATRVRRPLPGTRLFSGIDGASVLDVDTGLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEHHCCHHH
LARQIAEPVEWASCLAACVEAGATAFLELGPGRALAEMAGGAYPALPARSLADFRSVDGV
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TSWLARVAPG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]