| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689298
Identifier: 116689298
GI number: 116689298
Start: 1406262
End: 1406783
Strand: Direct
Name: 116689298
Synonym: Bcen2424_1276
Alternate gene names: NA
Gene position: 1406262-1406783 (Clockwise)
Preceding gene: 116689297
Following gene: 116689299
Centisome position: 40.36
GC content: 71.26
Gene sequence:
>522_bases ATGGCGCCCGCCATGAGACCAGCCGCCTTCCTCCTCGCCGCGTTCTGCTGCGCGACGAGCGTCCACGCCAGCCAGATTCT GTCCGACGCCGCATCGGTCGGCACGTACTTTTCGTATGACAACGCGGCGGCCGACGCGACCGTCGATCTGATCGAACAGG CGCAGCGCCGCGTGCTGCTGGCCGGCTATACGCAGGTGCCGCCGGCTGTCGCGAGCGCGCTGCGCGCGGCCCGCGCGCGG GGGATCGAGGTGCGCGTGGTGCTGGTGCGCCCGCCGCGTGCGGGCAGGTACAGCGGCGCCGGCTATCTGAAATCCGCGGG CATCGACGTCGCGATCGATTCGCGGCATGGCGGCCCCGCGTCGCGTTTCGTGATCGTCGACGACAGCGTCGCGCTGACGA CGCTGTCCGACGGCGCGGCCGAGCAGGCCGACACGGTCAACGTATTCCGGCGCGCGCCCGAACTCGCGCAGTCCTACGCG CAATCGTTCTGGCGGCTATACCGGCAGGCCGGCGGCCTCTGA
Upstream 100 bases:
>100_bases GGCTCGAAACACAGCGTCCGGGCACCGGTTTGGCACTGTGTGTTGCGCCGGCGCAGCAGCGTCGCAGCCGCCCCTTGCCA CGCGAATTGGCGTCGCTACA
Downstream 100 bases:
>100_bases CCCCTTCCTTGCGGCGCATCGCGCGCCGGTGTGACCCTGCTTGCATCGGCGCGACCGATGAACCATCCTCGTTGACAGGC GCCGGCGCGGCTTTCGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAPAMRPAAFLLAAFCCATSVHASQILSDAASVGTYFSYDNAAADATVDLIEQAQRRVLLAGYTQVPPAVASALRAARAR GIEVRVVLVRPPRAGRYSGAGYLKSAGIDVAIDSRHGGPASRFVIVDDSVALTTLSDGAAEQADTVNVFRRAPELAQSYA QSFWRLYRQAGGL
Sequences:
>Translated_173_residues MAPAMRPAAFLLAAFCCATSVHASQILSDAASVGTYFSYDNAAADATVDLIEQAQRRVLLAGYTQVPPAVASALRAARAR GIEVRVVLVRPPRAGRYSGAGYLKSAGIDVAIDSRHGGPASRFVIVDDSVALTTLSDGAAEQADTVNVFRRAPELAQSYA QSFWRLYRQAGGL >Mature_172_residues APAMRPAAFLLAAFCCATSVHASQILSDAASVGTYFSYDNAAADATVDLIEQAQRRVLLAGYTQVPPAVASALRAARARG IEVRVVLVRPPRAGRYSGAGYLKSAGIDVAIDSRHGGPASRFVIVDDSVALTTLSDGAAEQADTVNVFRRAPELAQSYAQ SFWRLYRQAGGL
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18246; Mature: 18115
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAMRPAAFLLAAFCCATSVHASQILSDAASVGTYFSYDNAAADATVDLIEQAQRRVLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHEEE AGYTQVPPAVASALRAARARGIEVRVVLVRPPRAGRYSGAGYLKSAGIDVAIDSRHGGPA ECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCCC SRFVIVDDSVALTTLSDGAAEQADTVNVFRRAPELAQSYAQSFWRLYRQAGGL CEEEEEECCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APAMRPAAFLLAAFCCATSVHASQILSDAASVGTYFSYDNAAADATVDLIEQAQRRVLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHEEE AGYTQVPPAVASALRAARARGIEVRVVLVRPPRAGRYSGAGYLKSAGIDVAIDSRHGGPA ECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCCC SRFVIVDDSVALTTLSDGAAEQADTVNVFRRAPELAQSYAQSFWRLYRQAGGL CEEEEEECCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA