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The map label for this gene is amaB [H]

Identifier: 116689275

GI number: 116689275

Start: 1384849

End: 1386126

Strand: Direct

Name: amaB [H]

Synonym: Bcen2424_1253

Alternate gene names: 116689275

Gene position: 1384849-1386126 (Clockwise)

Preceding gene: 116689274

Following gene: 116689276

Centisome position: 39.75

GC content: 70.81

Gene sequence:

>1278_bases
ATGCATATGAAAGACCTGCTGGAAATCGACGGCGCCCGCCTGTGGCAGAGCCTGACCGACATGGCGCGCGTCGGCGCGAC
CCCGCGCGGCGGCGTGCGGCGCCTCGCGCTGACCGATGACGACCGGCGCGGGCGCGACCTGTTCGCGCAATGGTGCCGCG
ACGCGGGAATGACGGTAAGCGTCGATGCGGTCGGCAACCTGTTCGCGCGGCGCGCCGGCGCCGATGCGCAGGCAGCGCCT
GTACTGATCGGCAGCCATCTCGACACGCAGCCCGAAGGCGGCCGCTTCGACGGCGTCTATGGCGTGCTCGCCGCGCTCGA
ACTCGTGCGCACGCTGAACGACGCGGGCATCGCGACCGACAAGCCGCTCGAGATCGTGTCCTGGACCAACGAGGAGGGCG
CACGCTTCGCGCCGGCGATGCTCGGCTCGGCCGTGTTCACGGGCGCGTTGCCGCTCGACGACGCGCTCGCGAAGCAGGAC
GCCGACGGCATCACGCTCGGCGCGGCGCTCGACGCGTGCGGCTATCGCGGCACGCGAGCAATGGTCGGCCCGGTCGATGC
GTATTTCGAGGCGCATATCGAACAGGGGCCCGTGCTCGAGGCGAACGGCACGACGATCGGCATCGTCACCGGTGGCCAGG
CGATTCGCTGGCTCGACGTGACGGTGACCGGCGTGGCCGCGCACGCGGGCACGACGCCGATGCCGTACCGCAAGGACGCG
TATTTCGCGAGTGCGCAGATCGCGCTCGAACTCGAACGGATCGTCGCCGGCTACGCGCCGCGCGGGCTCGCGACGATCGG
GCAAGTCGGCATTCGCAACGCGTCGCGCAATACGATTGCCGGCGACCTGACCTTCACGGTCGACCTGCGTCATCACGACG
ATGCCGAAGTCGATGCGATGGAGCGCGACCTGCGCGACGCCTGCGCACGCGTCGCCGCCGCGCGCGGCGTGCAGGTGGCG
ATCGATACCTGCTGGCGCAGCCCGGCGACGCCGTTCGACCGCGATTGCGTCGGGCTGGTCGCGCAGGCGGCCGCCGCGTT
CGGCTATACGCACGAGCGGATCGTGAGCGGCGCCGGCCACGATGCGATCCTGCTCGCGCGCCGTTTCCCGACCGCGATGG
TGTTCATTCCGTGCGTCGACGGCCTGTCGCACAACGAAGCCGAGGATGCATTGCCCGACGACGTGACGCGCGGCACGAAC
GTGCTGCTCCATGCGGTGCTGGCGCGCGCGGGTATCGCGGCGCGCGTCGATGCGGCTGCTGTCGCGCACGGCGCCTGA

Upstream 100 bases:

>100_bases
CTGCTCTGCATCGTCGCGCTCGATGCGCGCCGCGCCGCGCGGCCGGCCGCCGCCGAAGCGCTCGGCTCGCACTGACCTTC
AACGAACGAATCGATCCGGA

Downstream 100 bases:

>100_bases
TCCGGCGAATCGACGAGGACCATCATGAAAACCTATTTCCATCCCGAACAACTGCTGCACCATCCGCGCAGCTACCTGTC
GCGCGGCCAGATGCGCGAAC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MHMKDLLEIDGARLWQSLTDMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRAGADAQAAP
VLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATDKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQD
ADGITLGAALDACGYRGTRAMVGPVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDA
YFASAQIALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDLTFTVDLRHHDDAEVDAMERDLRDACARVAAARGVQVA
IDTCWRSPATPFDRDCVGLVAQAAAAFGYTHERIVSGAGHDAILLARRFPTAMVFIPCVDGLSHNEAEDALPDDVTRGTN
VLLHAVLARAGIAARVDAAAVAHGA

Sequences:

>Translated_425_residues
MHMKDLLEIDGARLWQSLTDMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRAGADAQAAP
VLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATDKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQD
ADGITLGAALDACGYRGTRAMVGPVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDA
YFASAQIALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDLTFTVDLRHHDDAEVDAMERDLRDACARVAAARGVQVA
IDTCWRSPATPFDRDCVGLVAQAAAAFGYTHERIVSGAGHDAILLARRFPTAMVFIPCVDGLSHNEAEDALPDDVTRGTN
VLLHAVLARAGIAARVDAAAVAHGA
>Mature_425_residues
MHMKDLLEIDGARLWQSLTDMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVSVDAVGNLFARRAGADAQAAP
VLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATDKPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQD
ADGITLGAALDACGYRGTRAMVGPVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDA
YFASAQIALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDLTFTVDLRHHDDAEVDAMERDLRDACARVAAARGVQVA
IDTCWRSPATPFDRDCVGLVAQAAAAFGYTHERIVSGAGHDAILLARRFPTAMVFIPCVDGLSHNEAEDALPDDVTRGTN
VLLHAVLARAGIAARVDAAAVAHGA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=394, Percent_Identity=33.502538071066, Blast_Score=207, Evalue=8e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44753; Mature: 44753

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMKDLLEIDGARLWQSLTDMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVS
CCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEE
VDAVGNLFARRAGADAQAAPVLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATD
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
KPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDADGITLGAALDACGYRGTRA
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHCCCCCCCE
MVGPVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDA
EECCHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCC
YFASAQIALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDLTFTVDLRHHDDAEVDAM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHHHH
ERDLRDACARVAAARGVQVAIDTCWRSPATPFDRDCVGLVAQAAAAFGYTHERIVSGAGH
HHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCC
DAILLARRFPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVLLHAVLARAGIAARVDAAA
CEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
VAHGA
HCCCC
>Mature Secondary Structure
MHMKDLLEIDGARLWQSLTDMARVGATPRGGVRRLALTDDDRRGRDLFAQWCRDAGMTVS
CCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEE
VDAVGNLFARRAGADAQAAPVLIGSHLDTQPEGGRFDGVYGVLAALELVRTLNDAGIATD
HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
KPLEIVSWTNEEGARFAPAMLGSAVFTGALPLDDALAKQDADGITLGAALDACGYRGTRA
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEHHHHHHCCCCCCCE
MVGPVDAYFEAHIEQGPVLEANGTTIGIVTGGQAIRWLDVTVTGVAAHAGTTPMPYRKDA
EECCHHHHHHHHCCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCC
YFASAQIALELERIVAGYAPRGLATIGQVGIRNASRNTIAGDLTFTVDLRHHDDAEVDAM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHHHH
ERDLRDACARVAAARGVQVAIDTCWRSPATPFDRDCVGLVAQAAAAFGYTHERIVSGAGH
HHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCC
DAILLARRFPTAMVFIPCVDGLSHNEAEDALPDDVTRGTNVLLHAVLARAGIAARVDAAA
CEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
VAHGA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]