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The map label for this gene is yccS [C]

Identifier: 116689235

GI number: 116689235

Start: 1336421

End: 1338715

Strand: Reverse

Name: yccS [C]

Synonym: Bcen2424_1213

Alternate gene names: 116689235

Gene position: 1338715-1336421 (Counterclockwise)

Preceding gene: 116689240

Following gene: 116689234

Centisome position: 38.43

GC content: 65.66

Gene sequence:

>2295_bases
ATGCGCTATTCGGTCGAAATCAGAAAGTTTTTCTACAGCCAGTACTTTTTCGGCGGCCTGCGGATCGCGGTCGGCGTGTC
GCTGCCGGCCGTGTTGTGCCTGATCGTGTTTCACAACCGCGAGCTTGGCTTCACGATCTCGACGGGCGCGCTCGGTGCGT
GCGTGGTCGACATGCCGGGCCCGCTGAAGTACAAACACAACGAAATGCTCGCGTGCAGCGTGATCGGCTTCCTGGCCGCG
CTCGCGACCGGTCTCGCGACCCCGAACATCTTCGCGCTGTGGCTCACGATCGTGCCGCTCACGTTCGTGCTGTCGCTGAT
CGTCGTCTACGGCAACCGCTGGCCGCAGATCAGCTTCGCGACGCTGTTCATGATGGTGATGACGCTCGAGGAGAAGTTCA
CGCCGCTGCAGGCGTTCGTCAACGCCGGCTGGATTCTCGCGGGCGGCCTCTGGTACACGTACTGGGCCACGCTCGTGTCG
CAATGGCAGGCGCGCCGAATCGAGCAGCAGGCGCTGGCCGAAAGCCTGTTCGCCTGCGCCGACTACCTGCTCGCGCGCGC
GCAGTTCTACGACCTCGACGCCGATCTCGACGAGTGCTACCGCAATCTCGTCGCCCGGCAGATCACCGCGGTCGAAACGC
AGGAAACCGCGCGCGACATCGTGCTGCGCAACCTGCCGAAGCTGCGGCGCGGCAAGCTCGATCCCGGCCGCACGACGATG
TACAACCTGTTCATCAACAGCGTCGACCTGCACGAGCTGTTCGTCGGCGCGCACACCGACTACCCGCTCGTGCGCAACAC
GTTCGGCGGCTCGGACCTGATCATTTTCTATCGCGACCTGATCCGCAAGGCCGCAGCCGATCTCGAGGAGGTCGGCCTCG
CGGTGCTCGAAAACCGCGCGCCGCATTCGCACATCAGCGTGAAGGCCGAGCTGCGCGCGATCGAGTACGAGATCGAGTTG
ATGCGCAAGAAAAACTTCGCGGCCACCCACGCGGAAGCCTATGCGGCCGTGGTCGCGACGTTCCGGCGCATCTGGAGCGC
GACGCGCCTGATCGACCGGATGCGCCGCAACCTGTCGGGCCACGCCGATCCGCAGCAAACCGAACTGAAGATCGACAAGG
CGCTCACGCGCTTCCTGCAGCGCCGCCGCATGTCGCCGCTGCTGATCTTCTCGAACCTGAACATGCGCTCGCCGAGCTTT
CGCCATGCACTGCGCGTGACGATCGCAGTGGCGGTCGGCTTCTGGATCGGCCGGCTGCTGCCGCTCACCAACGCGTACTG
GATCGTGATGACGACCATCATCATCCTGAAGCCCGGCTATTCGCTGACCAAGCAGCGCAACGCGGCGCGTATCGTCGGTA
CGCTGATCGGCTGCGCGGCGAGCGTCGCGCTGATCTACACGGTCAAGGATACGCACCTGCTGATCGCGATCATGTTCGGG
TCGATGGTGATGAGCTACAGCCTGCTGCTGTTCAACTATGCGGCGAGCGTCGTGTTCACGTCGTCATACGTGCTGCTGAT
GTTCCACCTGCTCGCGCCGGGCAGCATGCGGATCATCGGCGAACGCGCGATCGACACGGTGGTCGGCTGCATGATCGCGA
TCGCCGCGAGCCGGCTGTTCCCGTACTGGGAATACCGGCTGATGGGCAAGCTCGTCACCGACATGTTGACGTCCACCCGC
AAGTATTTCGAGGCCGTGTGGCGTGCCGGGCGCGGCATGTCGCCGCCGGTGCCGGTGCCGACCGCCGACGGTGCCGCCGT
CGTCGCGGGCGTCGCCGCCGCGATCGAATCCCCGACGGCCAGCCTCGACGACGACTACCGCTACCGCCTCGCCCGCAAGG
ACGTGCACATCGCGTTCGCGAACCTCGGGCAGGCGTTCCAGCGGATGATGATCGAGCCGAAGGCGCACCAGCGCTTCGTG
CCCGAACTGAACGACCTGCTCGTGCAGACGCACGTGCTCGGCGCGCAGATCACGGCCGCCGCGCCGCTGATCCGCAGCGC
ATGCGCGGCCGACGGCGGCCTCGTCCACGACGATGCGCTGCAGCGCGGCCTCGCCGCGGTGCTCGACAATCTCGAGAAGG
CCGAGGCCGGCGAGCCGCCGCCCACCGACCAGCTCGAAGCGTCGAAGCAGATCACGCGCGATCTCGATGCGATGGTCGTG
TCCGCGGAAAAATCCGATGCAGTCGGCGCCGAGCTCACGCACGACCTGAAGGTGCTCGCGCACCAGTGCAAACAGATGCT
CGCGTCGTCGCTGCTGATCCGCAAGGATGCGAGCGTGATCCGCCTGCCGGCCTGA

Upstream 100 bases:

>100_bases
CATCGTCCGGACAGCCAGCTTTTGCGAGCCGCGAAATACGATAGACTCGTCGCCAGTCAATACGCCGCCCCGGCGTCTTC
GTCTGTCATTCAGCCCATCG

Downstream 100 bases:

>100_bases
CCTCCGGCTGTCCGCGCCGGCAGGCCGGCCCGCGCACGACGCGGCTCGGCCACCGGCGCGCCTCGATTCAACGATCCCCC
GAAGCATGCTCCACCGCTCC

Product: protein of unknown function DUF893, YccS/YhfK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 764; Mature: 764

Protein sequence:

>764_residues
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQAFVNAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEVGLAVLENRAPHSHISVKAELRAIEYEIEL
MRKKNFAATHAEAYAAVVATFRRIWSATRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWIGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAARIVGTLIGCAASVALIYTVKDTHLLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKLVTDMLTSTR
KYFEAVWRAGRGMSPPVPVPTADGAAVVAGVAAAIESPTASLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFV
PELNDLLVQTHVLGAQITAAAPLIRSACAADGGLVHDDALQRGLAAVLDNLEKAEAGEPPPTDQLEASKQITRDLDAMVV
SAEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA

Sequences:

>Translated_764_residues
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQAFVNAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEVGLAVLENRAPHSHISVKAELRAIEYEIEL
MRKKNFAATHAEAYAAVVATFRRIWSATRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWIGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAARIVGTLIGCAASVALIYTVKDTHLLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKLVTDMLTSTR
KYFEAVWRAGRGMSPPVPVPTADGAAVVAGVAAAIESPTASLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFV
PELNDLLVQTHVLGAQITAAAPLIRSACAADGGLVHDDALQRGLAAVLDNLEKAEAGEPPPTDQLEASKQITRDLDAMVV
SAEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA
>Mature_764_residues
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQAFVNAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEVGLAVLENRAPHSHISVKAELRAIEYEIEL
MRKKNFAATHAEAYAAVVATFRRIWSATRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWIGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAARIVGTLIGCAASVALIYTVKDTHLLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKLVTDMLTSTR
KYFEAVWRAGRGMSPPVPVPTADGAAVVAGVAAAIESPTASLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFV
PELNDLLVQTHVLGAQITAAAPLIRSACAADGGLVHDDALQRGLAAVLDNLEKAEAGEPPPTDQLEASKQITRDLDAMVV
SAEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=689, Percent_Identity=22.9317851959361, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI87082248, Length=192, Percent_Identity=34.8958333333333, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84933; Mature: 84933

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFLAALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEEKFTPLQAFVNAGWILAGGLWYTYWATLVSQWQARRIEQQALAESLFACA
HHHHHHHHHHHHCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARAQFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHE
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEVGLAVLENRA
EHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PHSHISVKAELRAIEYEIELMRKKNFAATHAEAYAAVVATFRRIWSATRLIDRMRRNLSG
CCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSFRHALRVTIAVAVGFWIGRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTIIILKPGYSLTKQRNAARIVGTLIGCAASVALIYTVKDTHLLIAIMFG
HHCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
PYWEYRLMGKLVTDMLTSTRKYFEAVWRAGRGMSPPVPVPTADGAAVVAGVAAAIESPTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVPELNDLLVQTHVLGAQITAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
APLIRSACAADGGLVHDDALQRGLAAVLDNLEKAEAGEPPPTDQLEASKQITRDLDAMVV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEE
SAEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFLAALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEEKFTPLQAFVNAGWILAGGLWYTYWATLVSQWQARRIEQQALAESLFACA
HHHHHHHHHHHHCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARAQFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHE
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEVGLAVLENRA
EHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PHSHISVKAELRAIEYEIELMRKKNFAATHAEAYAAVVATFRRIWSATRLIDRMRRNLSG
CCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSFRHALRVTIAVAVGFWIGRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTIIILKPGYSLTKQRNAARIVGTLIGCAASVALIYTVKDTHLLIAIMFG
HHCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
PYWEYRLMGKLVTDMLTSTRKYFEAVWRAGRGMSPPVPVPTADGAAVVAGVAAAIESPTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVPELNDLLVQTHVLGAQITAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
APLIRSACAADGGLVHDDALQRGLAAVLDNLEKAEAGEPPPTDQLEASKQITRDLDAMVV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEE
SAEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]